RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 LEXMQ3ZCV2 418 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 ARHGAP29Q52LW3 1261 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 OTUD1Q5VV17 481 aaPredicted RBP18.56■□□□□ 0.56
SDC2-205ENST00000520233 STRADAQ7RTN6 431 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 TAC4Q86UU9 113 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 REXO1L1PQ8IX06 675 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 NIPA2Q8N8Q9 360 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 CENPIQ92674 756 aaPredicted RBP18.56■□□□□ 0.56
SDC2-205ENST00000520233 FGF13Q92913 245 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 BTBD6Q96KE9 485 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 SLC22A12Q96S37 553 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 LZTFL1Q9NQ48 299 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 KCND1Q9NSA2 647 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 CDH7Q9ULB5 785 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 GUCA1BQ9UMX6 200 aa18.56■□□□□ 0.56
SDC2-205ENST00000520233 CDH23Q9H251 3354 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 MACROD2A1Z1Q3 448 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 IRAK2O43187 625 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 F9P00740 461 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 CKMP06732 381 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 TFE3P19532 575 aaPredicted RBP18.55■□□□□ 0.56
SDC2-205ENST00000520233 AVPR1AP37288 418 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 KPNA1P52294 538 aaPredicted RBP18.55■□□□□ 0.56
SDC2-205ENST00000520233 NAP1L1P55209 391 aaKnown RBP18.55■□□□□ 0.56
SDC2-205ENST00000520233 COG7P83436 770 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 ATP11AP98196 1134 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 DEUP1Q05D60 604 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 TRIP4Q15650 581 aaPredicted RBP18.55■□□□□ 0.56
SDC2-205ENST00000520233 POTEHQ6S545 545 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 CCAR2Q8N163 923 aaKnown RBP18.55■□□□□ 0.56
SDC2-205ENST00000520233 TPCN2Q8NHX9 752 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 ADAM32Q8TC27 787 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 ZSWIM3Q96MP5 696 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 KLF16Q9BXK1 252 aaPredicted RBP18.55■□□□□ 0.56
SDC2-205ENST00000520233 ADAM33Q9BZ11 813 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 FAM204AQ9H8W3 233 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 DDIT4Q9NX09 232 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 TLR6Q9Y2C9 796 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 HBS1LQ9Y450 684 aaKnown RBP18.55■□□□□ 0.56
SDC2-205ENST00000520233 ANAPC1Q9H1A4 1944 aa18.55■□□□□ 0.56
SDC2-205ENST00000520233 SLC12A8A0AV02 714 aa18.54■□□□□ 0.56
SDC2-205ENST00000520233 PROSCO94903 275 aa18.54■□□□□ 0.56
SDC2-205ENST00000520233 MAN1A1P33908 653 aa18.54■□□□□ 0.56
SDC2-205ENST00000520233 RDXP35241 583 aaKnown RBP18.54■□□□□ 0.56
SDC2-205ENST00000520233 NME3Q13232 169 aa18.54■□□□□ 0.56
SDC2-205ENST00000520233 MESDQ14696 234 aa18.54■□□□□ 0.56
SDC2-205ENST00000520233 CDO1Q16878 200 aa18.54■□□□□ 0.56
SDC2-205ENST00000520233 PUS10Q3MIT2 529 aaKnown RBP18.54■□□□□ 0.56
SDC2-205ENST00000520233 SH3PXD2AQ5TCZ1 1133 aa18.54■□□□□ 0.56
SDC2-205ENST00000520233 MIB1Q86YT6 1006 aa18.54■□□□□ 0.56
SDC2-205ENST00000520233 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.54■□□□□ 0.56
SDC2-205ENST00000520233 KIAA1524Q8TCG1 905 aa18.54■□□□□ 0.56
SDC2-205ENST00000520233 FAM172AQ8WUF8 416 aa18.54■□□□□ 0.56
SDC2-205ENST00000520233 NCAPGQ9BPX3 1015 aa18.54■□□□□ 0.56
SDC2-205ENST00000520233 TRMT1Q9NXH9 659 aaKnown RBP18.54■□□□□ 0.56
SDC2-205ENST00000520233 CALCOCO1Q9P1Z2 691 aa18.54■□□□□ 0.56
SDC2-205ENST00000520233 ARHGAP26Q9UNA1 814 aa18.54■□□□□ 0.56
SDC2-205ENST00000520233 ZKSCAN5Q9Y2L8 839 aa18.54■□□□□ 0.56
SDC2-205ENST00000520233 PAXBP1Q9Y5B6 917 aa18.54■□□□□ 0.56
SDC2-205ENST00000520233 CPQQ9Y646 472 aa18.54■□□□□ 0.56
SDC2-205ENST00000520233 ZFP37Q9Y6Q3 630 aaPredicted RBP18.54■□□□□ 0.56
SDC2-205ENST00000520233 DENND4CQ5VZ89 1909 aa18.54■□□□□ 0.56
SDC2-205ENST00000520233 GOLGA6L9A6NEM1 432 aa18.53■□□□□ 0.56
SDC2-205ENST00000520233 MSI1O43347 362 aaKnown RBP18.53■□□□□ 0.56
SDC2-205ENST00000520233 BUB1BO60566 1050 aaPredicted RBP18.53■□□□□ 0.56
SDC2-205ENST00000520233 RNF8O76064 485 aa18.53■□□□□ 0.56
SDC2-205ENST00000520233 MOCS3O95396 460 aa18.53■□□□□ 0.56
SDC2-205ENST00000520233 GBP2P32456 591 aaPredicted RBP18.53■□□□□ 0.56
SDC2-205ENST00000520233 DEKP35659 375 aaKnown RBP18.53■□□□□ 0.56
SDC2-205ENST00000520233 HDAC4P56524 1084 aa18.53■□□□□ 0.56
SDC2-205ENST00000520233 TBX4P57082 545 aa18.53■□□□□ 0.56
SDC2-205ENST00000520233 RING1Q06587 406 aa18.53■□□□□ 0.56
SDC2-205ENST00000520233 C11orf63Q6NUN7 778 aa18.53■□□□□ 0.56
SDC2-205ENST00000520233 SND1Q7KZF4 910 aaKnown RBP eCLIP18.53■□□□□ 0.56
SDC2-205ENST00000520233 ZSCAN18Q8TBC5 510 aaPredicted RBP18.53■□□□□ 0.56
SDC2-205ENST00000520233 PLD4Q96BZ4 506 aa18.53■□□□□ 0.56
SDC2-205ENST00000520233 SLC39A13Q96H72 371 aa18.53■□□□□ 0.56
SDC2-205ENST00000520233 DOCK6Q96HP0 2047 aa18.53■□□□□ 0.56
SDC2-205ENST00000520233 ZFRQ96KR1 1074 aaKnown RBP18.53■□□□□ 0.56
SDC2-205ENST00000520233 MYADMQ96S97 322 aa18.53■□□□□ 0.56
SDC2-205ENST00000520233 PIGVQ9NUD9 493 aa18.53■□□□□ 0.56
SDC2-205ENST00000520233 TDP1Q9NUW8 608 aa18.53■□□□□ 0.56
SDC2-205ENST00000520233 DENND4AQ7Z401 1863 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 SYNJ2BP-COX16A0A087WUM0 186 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 USP27XA6NNY8 438 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 TMEM110-MUSTN1A8MSY1 372 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 IGLV3-27P01718 113 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 LAMP2P13473 410 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 TCF3P15923 654 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 PCK1P35558 622 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 SLC1A1P43005 524 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 CXCR3P49682 368 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 SMAD2Q15796 467 aaKnown RBP18.52■□□□□ 0.56
SDC2-205ENST00000520233 RAB6CQ53S08 254 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 OTOP3Q7RTS5 596 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 DDX42Q86XP3 938 aaKnown RBP eCLIP18.52■□□□□ 0.56
SDC2-205ENST00000520233 ARID3BQ8IVW6 561 aaPredicted RBP18.52■□□□□ 0.56
SDC2-205ENST00000520233 ARFGAP1Q8N6T3 406 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 SMARCD2Q92925 531 aa18.52■□□□□ 0.56
SDC2-205ENST00000520233 USP13Q92995 863 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms