RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ZBTB10Q96DT7 871 aa5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 MCRS1Q96EZ8 462 aa5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 TMX4Q9H1E5 349 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 ALG13Q9NP73 1137 aaKnown RBP5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 KLC4Q9NSK0 619 aa5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 CEP72Q9P209 647 aa5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 TESMINQ9Y4I5 508 aa5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 STX16-NPEPL1H3BU86 382 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 STX16O14662 325 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 NKX2-8O15522 239 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 SPRY2O43597 315 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 PMPCBO75439 489 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 TJP3O95049 919 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 TBX18O95935 607 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 ERBB2P04626 1255 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 CYP21A2P08686 494 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 DLDP09622 509 aaKnown RBP5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 NR4A1P22736 598 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 THBS4P35443 961 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 PSMC2P35998 433 aaKnown RBP5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 SUMO2P61956 95 aaKnown RBP5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 EIF2B5Q13144 721 aaKnown RBP5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 CBFBQ13951 182 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 R3HDM1Q15032 1099 aaKnown RBP5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 PTPRRQ15256 657 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 TREML2Q5T2D2 321 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 XP32Q5T750 250 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 GRHL2Q6ISB3 625 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 C4orf50Q6ZRC1 276 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 GPR149Q86SP6 731 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 ARHGEF19Q8IW93 802 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 TCP11L2Q8N4U5 519 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 PTGR2Q8N8N7 351 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 ST8SIA4Q92187 359 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 NPIPB3Q92617 1050 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 R3HDM4Q96D70 268 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 RRP36Q96EU6 259 aaKnown RBP5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 PIGSQ96S52 555 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 EHD3Q9NZN3 535 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 ADGRA2Q96PE1 1338 aa5.96□□□□□ -1.46
HMGB1P46-201ENST00000520062 A0A087X0M5 115 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 A0A1B0GX30 115 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 WDR27A2RRH5 827 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 MUSKO15146 869 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 TMEM63AO94886 807 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 FESP07332 822 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 HNRNPA1P09651 372 aaKnown RBP eCLIP5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 TPTEP56180 551 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 TLE3Q04726 772 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 BFSP2Q13515 415 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 DNASE1L3Q13609 305 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 FAM187BQ17R55 369 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 ZNF484Q5JVG2 852 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 WDR45BQ5MNZ6 344 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 MTHFD1LQ6UB35 978 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 RP9Q8TA86 221 aaKnown RBP5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 LOXL4Q96JB6 756 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 PBKQ96KB5 322 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 C7orf26Q96N11 449 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 NPAS1Q99742 590 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 DPCDQ9BVM2 203 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 PAIP1Q9H074 479 aaKnown RBP5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 KLC2Q9H0B6 622 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 TBC1D22BQ9NU19 505 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 IRAK4Q9NWZ3 460 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 KCTD5Q9NXV2 234 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 ARHGAP26Q9UNA1 814 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 FZD1Q9UP38 647 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 PCDHB7Q9Y5E2 793 aa5.95□□□□□ -1.46
HMGB1P46-201ENST00000520062 M0QZQ0 153 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 TMPRSS11DO60235 418 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 RNASEH2AO75792 299 aaKnown RBP5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 HEXIM1O94992 359 aaKnown RBP5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 RHOP08100 348 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 CYP3A4P08684 503 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 TNNT1P13805 278 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 CREB1P16220 341 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 MCM5P33992 734 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 CLCN2P51788 898 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 FAM3BP58499 235 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 RPL15P61313 204 aaKnown RBP5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 BLOC1S1P78537 153 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 SLC25A3Q00325 362 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 PDCLQ13371 301 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 TP53BP2Q13625 1128 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 BMPR2Q13873 1038 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 PDE1CQ14123 709 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 BAK1Q16611 211 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 CYP1B1Q16678 543 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 NBPF8Q3BBV2 869 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 TIGD2Q4W5G0 525 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 ABHD17BQ5VST6 288 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 DENND2CQ68D51 928 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 ZNF585AQ6P3V2 769 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 ACSM6Q6P461 480 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 LRRC8DQ7L1W4 858 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 P3H2Q8IVL5 708 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 SIRT6Q8N6T7 355 aa5.94□□□□□ -1.46
HMGB1P46-201ENST00000520062 PNPLA1Q8N8W4 532 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms