RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 SLC35C1Q96A29 364 aa13.06□□□□□ -0.32
CSMD1-205ENST00000519623 SPACA7Q96KW9 195 aa13.06□□□□□ -0.32
CSMD1-205ENST00000519623 TIGD1Q96MW7 591 aa13.06□□□□□ -0.32
CSMD1-205ENST00000519623 CDK5RAP1Q96SZ6 601 aaKnown RBP13.06□□□□□ -0.32
CSMD1-205ENST00000519623 TSG101Q99816 390 aa13.06□□□□□ -0.32
CSMD1-205ENST00000519623 GABRG3Q99928 467 aa13.06□□□□□ -0.32
CSMD1-205ENST00000519623 PLK2Q9NYY3 685 aa13.06□□□□□ -0.32
CSMD1-205ENST00000519623 CIZ1Q9ULV3 898 aaPredicted RBP13.06□□□□□ -0.32
CSMD1-205ENST00000519623 ZNF510Q9Y2H8 683 aa13.06□□□□□ -0.32
CSMD1-205ENST00000519623 KMT2BQ9UMN6 2715 aaPredicted RBP13.06□□□□□ -0.32
CSMD1-205ENST00000519623 TRIM49BA6NDI0 452 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 GOLGA6L4A6NEF3 574 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 PCNX2A6NKB5 2137 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 WASH3PC4AMC7 463 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 SMC2O95347 1197 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 ZBED1O96006 694 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 KCNA4P22459 653 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 PMLP29590 882 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 TKTL1P51854 596 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 YWHAGP61981 247 aaKnown RBP eCLIP13.05□□□□□ -0.32
CSMD1-205ENST00000519623 PDE4CQ08493 712 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 DCAF17Q5H9S7 520 aaPredicted RBP13.05□□□□□ -0.32
CSMD1-205ENST00000519623 SDE2Q6IQ49 451 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 ARMCX6Q7L4S7 300 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 BHLHA9Q7RTU4 235 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 SYT12Q8IV01 421 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 CHPFQ8IZ52 775 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 ARHGAP18Q8N392 663 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 UBR7Q8N806 425 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 IPO4Q8TEX9 1081 aaKnown RBP13.05□□□□□ -0.32
CSMD1-205ENST00000519623 NDRG1Q92597 394 aaKnown RBP13.05□□□□□ -0.32
CSMD1-205ENST00000519623 BHMTQ93088 406 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 SMARCE1Q969G3 411 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 DCLK3Q9C098 648 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 MARCH2Q9P0N8 246 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 CALCOCO1Q9P1Z2 691 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 ARMCX3Q9UH62 379 aaPredicted RBP13.05□□□□□ -0.32
CSMD1-205ENST00000519623 EVLQ9UI08 416 aaPredicted RBP13.05□□□□□ -0.32
CSMD1-205ENST00000519623 RASAL2Q9UJF2 1139 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 AGO1Q9UL18 857 aaKnown RBP13.05□□□□□ -0.32
CSMD1-205ENST00000519623 SLC27A6Q9Y2P4 619 aa13.05□□□□□ -0.32
CSMD1-205ENST00000519623 GFRA2O00451 464 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 GIPC1O14908 333 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 XPO1O14980 1071 aaKnown RBP13.04□□□□□ -0.32
CSMD1-205ENST00000519623 HMBSP08397 361 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 CD44P16070 742 aaKnown RBP13.04□□□□□ -0.32
CSMD1-205ENST00000519623 ITPKAP23677 461 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 CORO1AP31146 461 aaKnown RBP13.04□□□□□ -0.32
CSMD1-205ENST00000519623 CHKAP35790 457 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 NUCB2P80303 420 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 LRRC63Q05C16 580 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 GOLGA7BQ2TAP0 167 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 DAB2IPQ5VWQ8 1189 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 ISM2Q6H9L7 571 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 DENND1CQ8IV53 801 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 ELOA2Q8IYF1 753 aaPredicted RBP13.04□□□□□ -0.32
CSMD1-205ENST00000519623 DEFB119Q8N690 84 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 ERLEC1Q96DZ1 483 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 GTPBP4Q9BZE4 634 aaKnown RBP13.04□□□□□ -0.32
CSMD1-205ENST00000519623 ULBP1Q9BZM6 244 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 TMEM9BQ9NQ34 198 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 CACNA2D2Q9NY47 1150 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 PILRBQ9UKJ0 227 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 TSPAN16Q9UKR8 245 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 CLEC4EQ9ULY5 219 aa13.04□□□□□ -0.32
CSMD1-205ENST00000519623 CEP295Q9C0D2 2601 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 IGHV1OR15-9A0A0B4J2B8 117 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 SLC12A8A0AV02 714 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 PMM2O15305 246 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 GABBR2O75899 941 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 VDRP11473 427 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 NDUFV2P19404 249 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 FMO5P49326 533 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 MFAP3P55082 362 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 SLC8A3P57103 927 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 LRMPQ12912 555 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 TRIP4Q15650 581 aaPredicted RBP13.03□□□□□ -0.32
CSMD1-205ENST00000519623 GEN1Q17RS7 908 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 PKDCCQ504Y2 493 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 SGO2Q562F6 1265 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 TRIM61Q5EBN2 209 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 PEAR1Q5VY43 1037 aaPredicted RBP13.03□□□□□ -0.32
CSMD1-205ENST00000519623 LYSMD4Q5XG99 296 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 PSAPL1Q6NUJ1 521 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 SLC23A3Q6PIS1 610 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 SLC36A4Q6YBV0 504 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 RSRC2Q7L4I2 434 aaKnown RBP13.03□□□□□ -0.32
CSMD1-205ENST00000519623 FAM217AQ8IXS0 508 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 CPXM2Q8N436 756 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 LMO3Q8TAP4 145 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 UBA3Q8TBC4 463 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 TFAP2BQ92481 460 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 DHTKD1Q96HY7 919 aaPredicted RBP13.03□□□□□ -0.32
CSMD1-205ENST00000519623 PIWIL1Q96J94 861 aaKnown RBP13.03□□□□□ -0.32
CSMD1-205ENST00000519623 MRGPRX1Q96LB2 322 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 METTL14Q9HCE5 456 aaKnown RBP13.03□□□□□ -0.32
CSMD1-205ENST00000519623 KIAA1257Q9ULG3 409 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 STRIP2Q9ULQ0 834 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 RAD54BQ9Y620 910 aa13.03□□□□□ -0.32
CSMD1-205ENST00000519623 PPP1R3GB7ZBB8 358 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms