RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 PLEKHA7Q6IQ23 1121 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 PIGZQ86VD9 579 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 MFSD6LQ8IWD5 586 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 YAF2Q8IY57 180 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 MCOLN2Q8IZK6 566 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 CELF5Q8N6W0 485 aaKnown RBP7.95□□□□□ -1.14
SDCBP-206ENST00000519115 ANKRD52Q8NB46 1076 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 FLCNQ8NFG4 579 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 BPIFB1Q8TDL5 484 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 FNIP1Q8TF40 1166 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 DEPDC1BQ8WUY9 529 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 HSFY1Q96LI6 401 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 PCDHB18PQ96TA0 734 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 TBC1D17Q9HA65 648 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 ACP6Q9NPH0 428 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 LZTFL1Q9NQ48 299 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 RRAGDQ9NQL2 400 aaPredicted RBP7.95□□□□□ -1.14
SDCBP-206ENST00000519115 HEBP1Q9NRV9 189 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 TDP1Q9NUW8 608 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 PARVAQ9NVD7 372 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 SMPD4Q9NXE4 827 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 IL37Q9NZH6 218 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 HESX1Q9UBX0 185 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 CHORDC1Q9UHD1 332 aaPredicted RBP7.95□□□□□ -1.14
SDCBP-206ENST00000519115 ZMYM5Q9UJ78 669 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 GUCA1BQ9UMX6 200 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.95□□□□□ -1.14
SDCBP-206ENST00000519115 SCINQ9Y6U3 715 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 MUC6Q6W4X9 2439 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 CACNA1IQ9P0X4 2223 aa7.95□□□□□ -1.14
SDCBP-206ENST00000519115 A0A1W2PQH9 124 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 RCCD1A6NED2 376 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 MIF4GDA9UHW6 222 aaKnown RBP7.94□□□□□ -1.14
SDCBP-206ENST00000519115 COCHO43405 550 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 OAS1P00973 400 aaKnown RBP7.94□□□□□ -1.14
SDCBP-206ENST00000519115 TUBBP07437 444 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 MMEP08473 750 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 MBL2P11226 248 aaPredicted RBP7.94□□□□□ -1.14
SDCBP-206ENST00000519115 TCP1P17987 556 aaKnown RBP7.94□□□□□ -1.14
SDCBP-206ENST00000519115 HDCP19113 662 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 CD72P21854 359 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 SLC1A1P43005 524 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 ACADSBP45954 432 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 RGS7P49802 495 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 VCPP55072 806 aaKnown RBP7.94□□□□□ -1.14
SDCBP-206ENST00000519115 NOMO3P69849 1222 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 PFKPQ01813 784 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 TNK2Q07912 1038 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 FCHO2Q0JRZ9 810 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 ADIGQ0VDE8 80 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 BST2Q10589 180 aaKnown RBP7.94□□□□□ -1.14
SDCBP-206ENST00000519115 USP4Q13107 963 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 MLF2Q15773 248 aaPredicted RBP7.94□□□□□ -1.14
SDCBP-206ENST00000519115 PKDCCQ504Y2 493 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 CWF19L1Q69YN2 538 aaKnown RBP7.94□□□□□ -1.14
SDCBP-206ENST00000519115 C11orf63Q6NUN7 778 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 TPRG1Q6ZUI0 275 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 TMEM110Q86TL2 294 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 SUGP1Q8IWZ8 645 aaKnown RBP7.94□□□□□ -1.14
SDCBP-206ENST00000519115 SCML4Q8N228 414 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 FBXL6Q8N531 539 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 LRRC57Q8N9N7 239 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 C1orf131Q8NDD1 294 aaKnown RBP7.94□□□□□ -1.14
SDCBP-206ENST00000519115 PDZD8Q8NEN9 1154 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 TTC8Q8TAM2 541 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 SLC35G2Q8TBE7 412 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 SH3RF2Q8TEC5 729 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 OVCA2Q8WZ82 227 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 NDRG1Q92597 394 aaKnown RBP7.94□□□□□ -1.14
SDCBP-206ENST00000519115 IRF7Q92985 503 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 E2F7Q96AV8 911 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 C16orf45Q96MC5 204 aaPredicted RBP7.94□□□□□ -1.14
SDCBP-206ENST00000519115 NAPGQ99747 312 aaPredicted RBP7.94□□□□□ -1.14
SDCBP-206ENST00000519115 MFRPQ9BY79 579 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 FOXQ1Q9C009 403 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 RNF38Q9H0F5 515 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 PDCL3Q9H2J4 239 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 FBXO44Q9H4M3 255 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 CCSER2Q9H7U1 834 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 KIF9Q9HAQ2 790 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 PNPLA8Q9NP80 782 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 WNT16Q9UBV4 365 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 RAPGEFL1Q9UHV5 662 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 NUDT5Q9UKK9 219 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 TTC7AQ9ULT0 858 aaPredicted RBP7.94□□□□□ -1.14
SDCBP-206ENST00000519115 SCML2Q9UQR0 700 aa7.94□□□□□ -1.14
SDCBP-206ENST00000519115 FAM92AA1XBS5 289 aa7.93□□□□□ -1.14
SDCBP-206ENST00000519115 SIGLEC16A6NMB1 481 aa7.93□□□□□ -1.14
SDCBP-206ENST00000519115 ARNTLO00327 626 aa7.93□□□□□ -1.14
SDCBP-206ENST00000519115 PIK3R2O00459 728 aa7.93□□□□□ -1.14
SDCBP-206ENST00000519115 XPO1O14980 1071 aaKnown RBP7.93□□□□□ -1.14
SDCBP-206ENST00000519115 MDM4O15151 490 aa7.93□□□□□ -1.14
SDCBP-206ENST00000519115 CHADO15335 359 aa7.93□□□□□ -1.14
SDCBP-206ENST00000519115 THAP12O43422 761 aa7.93□□□□□ -1.14
SDCBP-206ENST00000519115 TLR5O60602 858 aa7.93□□□□□ -1.14
SDCBP-206ENST00000519115 OLFM2O95897 454 aa7.93□□□□□ -1.14
SDCBP-206ENST00000519115 ZDHHC11BP0C7U3 371 aa7.93□□□□□ -1.14
SDCBP-206ENST00000519115 IRF1P10914 325 aa7.93□□□□□ -1.14
SDCBP-206ENST00000519115 ARSAP15289 507 aa7.93□□□□□ -1.14
SDCBP-206ENST00000519115 WEE1P30291 646 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms