RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 EXD1Q8NHP7 514 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 DDX1Q92499 740 aaKnown RBP13.99□□□□□ -0.17
PABPC1-208ENST00000519004 CPT1BQ92523 772 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 MMP19Q99542 508 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 SENP7Q9BQF6 1050 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 CXorf21Q9HAI6 301 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 THAP1Q9NVV9 213 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 SERPINA10Q9UK55 444 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 RABL2BQ9UNT1 228 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 DNAJC16Q9Y2G8 782 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 SLIT2O94813 1529 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 A0A087WXM4 84 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 A6NL46 340 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 TRIM49D1C9J1S8 452 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 RNASEH2AO75792 299 aaKnown RBP13.99□□□□□ -0.17
PABPC1-208ENST00000519004 FAM155BO75949 473 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 COX4I1P13073 169 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 THOP1P52888 689 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 SPIRE1Q08AE8 756 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 NAT8LQ8N9F0 302 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 RDH13Q8NBN7 331 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 OR7G1Q8NGA0 311 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 LILRB4Q8NHJ6 448 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 NPLQ9BXD5 320 aaPredicted RBP13.99□□□□□ -0.17
PABPC1-208ENST00000519004 KLHL11Q9NVR0 708 aa13.99□□□□□ -0.17
PABPC1-208ENST00000519004 DRG1Q9Y295 367 aaKnown RBP13.99□□□□□ -0.17
PABPC1-208ENST00000519004 SCN7AQ01118 1682 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 TCRBV9S1A1TA0A576 114 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 LYPLA1O75608 230 aaPredicted RBP13.98□□□□□ -0.17
PABPC1-208ENST00000519004 P4HA1P13674 534 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 GRM5P41594 1212 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 IDH3AP50213 366 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 NFX1Q12986 1120 aaKnown RBP13.98□□□□□ -0.17
PABPC1-208ENST00000519004 IKBKEQ14164 716 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 BBS9Q3SYG4 887 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 AGAP7PQ5VUJ5 663 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 GPR107Q5VW38 600 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 TMEM26Q6ZUK4 368 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 IGDCC3Q8IVU1 814 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 TMCO5AQ8N6Q1 288 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 PIWIL2Q8TC59 973 aaKnown RBP13.98□□□□□ -0.17
PABPC1-208ENST00000519004 ACDQ96AP0 544 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 KLHL32Q96NJ5 620 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 RTKNQ9BST9 563 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 HERC2P3Q9BVR0 1158 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 FRMD8Q9BZ67 464 aaPredicted RBP13.98□□□□□ -0.17
PABPC1-208ENST00000519004 NAA50Q9GZZ1 169 aaKnown RBP13.98□□□□□ -0.17
PABPC1-208ENST00000519004 COQ10BQ9H8M1 238 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 AVENQ9NQS1 362 aaPredicted RBP13.98□□□□□ -0.17
PABPC1-208ENST00000519004 IKBKGQ9Y6K9 419 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 ERVV-2B6SEH9 535 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 SNAP91O60641 907 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 IFNB1P01574 187 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 MYCLP1P12525 358 aaPredicted RBP13.98□□□□□ -0.17
PABPC1-208ENST00000519004 TSHRP16473 764 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 ADAM17P78536 824 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 LRP8Q14114 963 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 SLC27A3Q5K4L6 730 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 SCARA3Q6AZY7 606 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 C16orf46Q6P387 395 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 GALNT18Q6P9A2 607 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 DNAJC10Q8IXB1 793 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 PPIL6Q8IXY8 311 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 ZNF444Q8N0Y2 327 aaPredicted RBP13.98□□□□□ -0.17
PABPC1-208ENST00000519004 BHLHE22Q8NFJ8 381 aaPredicted RBP13.98□□□□□ -0.17
PABPC1-208ENST00000519004 TMEM121Q9BTD3 319 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 C10orf88Q9H8K7 445 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 PRPF19Q9UMS4 504 aaKnown RBP13.98□□□□□ -0.17
PABPC1-208ENST00000519004 AP4S1Q9Y587 144 aa13.98□□□□□ -0.17
PABPC1-208ENST00000519004 LOC105371267A0A1B0GV96 52 aa13.97□□□□□ -0.17
PABPC1-208ENST00000519004 TCRBV7S3A2A0A539 114 aa13.97□□□□□ -0.17
PABPC1-208ENST00000519004 USP17L5A8MUK1 530 aa13.97□□□□□ -0.17
PABPC1-208ENST00000519004 PI4K2BG5E9Z4 385 aa13.97□□□□□ -0.17
PABPC1-208ENST00000519004 ZC3H11AO75152 810 aaKnown RBP eCLIP13.97□□□□□ -0.17
PABPC1-208ENST00000519004 FARP2O94887 1054 aaPredicted RBP13.97□□□□□ -0.17
PABPC1-208ENST00000519004 GAP43P17677 238 aa13.97□□□□□ -0.17
PABPC1-208ENST00000519004 NR4A1P22736 598 aa13.97□□□□□ -0.17
PABPC1-208ENST00000519004 MSX2P35548 267 aaPredicted RBP13.97□□□□□ -0.17
PABPC1-208ENST00000519004 EIF3EP60228 445 aaKnown RBP13.97□□□□□ -0.17
PABPC1-208ENST00000519004 MS4A2Q01362 244 aa13.97□□□□□ -0.17
PABPC1-208ENST00000519004 DPYSQ14117 519 aa13.97□□□□□ -0.17
PABPC1-208ENST00000519004 PARP10Q53GL7 1025 aa13.97□□□□□ -0.17
PABPC1-208ENST00000519004 TTC39BQ5VTQ0 682 aaPredicted RBP13.97□□□□□ -0.17
PABPC1-208ENST00000519004 TTC30AQ86WT1 665 aa13.97□□□□□ -0.17
PABPC1-208ENST00000519004 MCOLN2Q8IZK6 566 aa13.97□□□□□ -0.17
PABPC1-208ENST00000519004 MYO1HQ8N1T3 1032 aa13.97□□□□□ -0.17
PABPC1-208ENST00000519004 Q8N9G6 341 aaPredicted RBP13.97□□□□□ -0.17
PABPC1-208ENST00000519004 SHC3Q92529 594 aa13.97□□□□□ -0.17
PABPC1-208ENST00000519004 ANKRD60Q9BZ19 345 aa13.97□□□□□ -0.17
PABPC1-208ENST00000519004 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.97□□□□□ -0.17
PABPC1-208ENST00000519004 KMOO15229 486 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 JRKO75564 520 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 TMEM63AO94886 807 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 ZNF182P17025 639 aaPredicted RBP13.96□□□□□ -0.17
PABPC1-208ENST00000519004 GNL1P36915 607 aaPredicted RBP13.96□□□□□ -0.17
PABPC1-208ENST00000519004 GCLMP48507 274 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 OTUD4Q01804 1114 aaKnown RBP13.96□□□□□ -0.17
PABPC1-208ENST00000519004 PMS2P3Q13401 168 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 TEDDM1Q5T9Z0 273 aa13.96□□□□□ -0.17
PABPC1-208ENST00000519004 PCGF5Q86SE9 256 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms