RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 NAALADL1Q9UQQ1 740 aa13.92□□□□□ -0.18
VEGFA-219ENST00000518824 ZFHX2Q9C0A1 2572 aaPredicted RBP13.91□□□□□ -0.18
VEGFA-219ENST00000518824 MYO18AQ92614 2054 aaKnown RBP13.91□□□□□ -0.18
VEGFA-219ENST00000518824 USP34Q70CQ2 3546 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 MED7O43513 233 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 GFRA3O60609 400 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 KAT7O95251 611 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 TYRP14679 529 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 COG7P83436 770 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 PDCLQ13371 301 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 TRIP4Q15650 581 aaPredicted RBP13.91□□□□□ -0.18
VEGFA-219ENST00000518824 TAF3Q5VWG9 929 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 SYPL2Q5VXT5 272 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 MSANTD2Q6P1R3 559 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 TMEM110Q86TL2 294 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 CCDC33Q8N5R6 958 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 ADAM32Q8TC27 787 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 USP33Q8TEY7 942 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 IRGQQ8WZA9 623 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 FAM81BQ96LP2 452 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 HHIPQ96QV1 700 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 CDK5RAP1Q96SZ6 601 aaKnown RBP13.91□□□□□ -0.18
VEGFA-219ENST00000518824 PNKPQ96T60 521 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 IER2Q9BTL4 223 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 BBS2Q9BXC9 721 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 ARHGEF4Q9NR80 690 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 ABCC13Q9NSE7 274 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 FAM207AQ9NSI2 230 aaPredicted RBP13.91□□□□□ -0.18
VEGFA-219ENST00000518824 ZSCAN32Q9NX65 697 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 PCDHGC3Q9UN70 934 aa13.91□□□□□ -0.18
VEGFA-219ENST00000518824 SYCE3A1L190 88 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 LGALS16A8MUM7 142 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 TEX33O43247 280 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 LILRB5O75023 590 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 PAPSS2O95340 614 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-219ENST00000518824 ERBB2P04626 1255 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 CISD3P0C7P0 127 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 TIE1P35590 1138 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 SGSHP51688 502 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 POLR2FP61218 127 aaKnown RBP13.9□□□□□ -0.18
VEGFA-219ENST00000518824 PTK2Q05397 1052 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 GOLGA8FQ08AF8 430 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 GOLGA8DPQ0D2H9 430 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 SYCP1Q15431 976 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 PTPN20Q4JDL3 420 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 FYB2Q5VWT5 728 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 TADA2BQ86TJ2 420 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 NOP9Q86U38 636 aaKnown RBP13.9□□□□□ -0.18
VEGFA-219ENST00000518824 SUMF1Q8NBK3 374 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 DQX1Q8TE96 717 aaKnown RBP13.9□□□□□ -0.18
VEGFA-219ENST00000518824 RNF139Q8WU17 664 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 DDX1Q92499 740 aaKnown RBP13.9□□□□□ -0.18
VEGFA-219ENST00000518824 NKD2Q969F2 451 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-219ENST00000518824 MYEOVQ96EZ4 313 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 NLRC4Q9NPP4 1024 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 DNAJC17Q9NVM6 304 aaKnown RBP13.9□□□□□ -0.18
VEGFA-219ENST00000518824 MARK1Q9P0L2 795 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 STRIP2Q9ULQ0 834 aa13.9□□□□□ -0.18
VEGFA-219ENST00000518824 A0A0A0MRY4 1105 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 GOLGA6L7A0A1B0GV03 622 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 PRRT4C9JH25 899 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 F8VZ95 297 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 HRO43593 1189 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 CACNG3O60359 315 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 TSPAN3O60637 253 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 GRAP2O75791 330 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 FBXO21O94952 628 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 IGLV3-27P01718 113 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 APODP05090 189 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 MMEP08473 750 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 NCAM1P13591 858 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 CYP11B1P15538 503 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 EIF2DP41214 584 aaKnown RBP13.89□□□□□ -0.19
VEGFA-219ENST00000518824 KIR2DL1P43626 348 aaPredicted RBP13.89□□□□□ -0.19
VEGFA-219ENST00000518824 JAM2P57087 298 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 IQCB1Q15051 598 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 LPAL2Q16609 132 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 MEA1Q16626 185 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 KLHL40Q2TBA0 621 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 C2CD6Q53TS8 623 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 TMEM92Q6UXU6 159 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 FAM183BPQ6ZVS7 135 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 TAC4Q86UU9 113 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 ALLCQ8N6M5 410 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 STK32AQ8WU08 396 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 SLC20A1Q8WUM9 679 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 FAM149B1Q96BN6 582 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 PLD4Q96BZ4 506 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 ERLEC1Q96DZ1 483 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 PPP1R13BQ96KQ4 1090 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 STK33Q9BYT3 514 aa13.89□□□□□ -0.19
VEGFA-219ENST00000518824 OLA1Q9NTK5 396 aaKnown RBP13.89□□□□□ -0.19
VEGFA-219ENST00000518824 HBS1LQ9Y450 684 aaKnown RBP13.89□□□□□ -0.19
VEGFA-219ENST00000518824 GPR179Q6PRD1 2367 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 PIEZO1Q92508 2521 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 LRRC10BA6NIK2 292 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 SGK1O00141 431 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 GFRA2O00451 464 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 ADAM23O75077 832 aa13.88□□□□□ -0.19
VEGFA-219ENST00000518824 GFPT2O94808 682 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms