RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 PIGVQ9NUD9 493 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 DDIT4Q9NX09 232 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 DDX56Q9NY93 547 aaKnown RBP11.02□□□□□ -0.65
PABPC1-203ENST00000517921 RNF14Q9UBS8 474 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 MAGED2Q9UNF1 606 aaPredicted RBP11.02□□□□□ -0.65
PABPC1-203ENST00000517921 DENND4AQ7Z401 1863 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 NYNRINQ9P2P1 1898 aaKnown RBP11.02□□□□□ -0.65
PABPC1-203ENST00000517921 SYNJ2BP-COX16A0A087WUM0 186 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 C3orf70A6NLC5 250 aaPredicted RBP11.01□□□□□ -0.65
PABPC1-203ENST00000517921 PI4K2BG5E9Z4 385 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 PGRMC1O00264 195 aaKnown RBP11.01□□□□□ -0.65
PABPC1-203ENST00000517921 MDM4O15151 490 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 IRAK2O43187 625 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 SLU7O95391 586 aaKnown RBP11.01□□□□□ -0.65
PABPC1-203ENST00000517921 RARGP13631 454 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 ARSEP51690 589 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 DEUP1Q05D60 604 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 NME3Q13232 169 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 KCNT1Q5JUK3 1230 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 CCDC181Q5TID7 509 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 SNX30Q5VWJ9 437 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 SCYL2Q6P3W7 929 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 MFSD7Q6UXD7 560 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 ANKS1BQ7Z6G8 1248 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 ITIH5Q86UX2 942 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 PDZD8Q8NEN9 1154 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 CMASQ8NFW8 434 aaPredicted RBP11.01□□□□□ -0.65
PABPC1-203ENST00000517921 SLC22A17Q8WUG5 538 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 HSPH1Q92598 858 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 CASP10Q92851 521 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 RBM41Q96IZ5 413 aaKnown RBP11.01□□□□□ -0.65
PABPC1-203ENST00000517921 HERPUD2Q9BSE4 406 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 IL21Q9HBE4 155 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 ZNF334Q9HCZ1 680 aaPredicted RBP11.01□□□□□ -0.65
PABPC1-203ENST00000517921 MAN1C1Q9NR34 630 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.01□□□□□ -0.65
PABPC1-203ENST00000517921 GPATCH2LQ9NWQ4 482 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 CLIC5Q9NZA1 410 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 COX16Q9P0S2 106 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 NUDT5Q9UKK9 219 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 ASB3Q9Y575 518 aa11.01□□□□□ -0.65
PABPC1-203ENST00000517921 COL6A3P12111 3177 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 LRRD1A4D1F6 860 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 ZNF840PA6NDX5 716 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 I6L893 689 aaPredicted RBP11□□□□□ -0.65
PABPC1-203ENST00000517921 MSI1O43347 362 aaKnown RBP11□□□□□ -0.65
PABPC1-203ENST00000517921 ZRANB2O95218 330 aaKnown RBP eCLIP11□□□□□ -0.65
PABPC1-203ENST00000517921 F9P00740 461 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 FGGP02679 453 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 LRG1P02750 347 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 CD48P09326 243 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 RALAP11233 206 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 EPCAMP16422 314 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 PTPN7P35236 360 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 CDKN2BP42772 138 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 PAFAH1B1P43034 410 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 CXCR3P49682 368 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 COPS2P61201 443 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 SCAPQ12770 1279 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 CCDC85BQ15834 202 aaPredicted RBP11□□□□□ -0.65
PABPC1-203ENST00000517921 TAF12Q16514 161 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 PPP2R5EQ16537 467 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 DPYSL2Q16555 572 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 TAZQ16635 292 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 CA9Q16790 459 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 BOLA3Q53S33 107 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 ZC3H12AQ5D1E8 599 aaKnown RBP11□□□□□ -0.65
PABPC1-203ENST00000517921 ZFYVE27Q5T4F4 411 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 ERMARDQ5T6L9 678 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 SPOCD1Q6ZMY3 1216 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 RTL10Q7L3V2 364 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 RSRC2Q7L4I2 434 aaKnown RBP11□□□□□ -0.65
PABPC1-203ENST00000517921 DNAJB7Q7Z6W7 309 aaPredicted RBP11□□□□□ -0.65
PABPC1-203ENST00000517921 SLC13A5Q86YT5 568 aaPredicted RBP11□□□□□ -0.65
PABPC1-203ENST00000517921 TMC8Q8IU68 726 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 CCDC50Q8IVM0 306 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 RCOR2Q8IZ40 523 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 MICALL1Q8N3F8 863 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 ZNF276Q8N554 614 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 CEP112Q8N8E3 955 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 RNF139Q8WU17 664 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 NTAN1Q96AB6 310 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 RNF25Q96BH1 459 aaPredicted RBP11□□□□□ -0.65
PABPC1-203ENST00000517921 SERPINB11Q96P15 392 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 PLEKHA4Q9H4M7 779 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 OLA1Q9NTK5 396 aaKnown RBP11□□□□□ -0.65
PABPC1-203ENST00000517921 STAU2Q9NUL3 570 aaKnown RBP eCLIP11□□□□□ -0.65
PABPC1-203ENST00000517921 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11□□□□□ -0.652e-6■■■□□ 15.6
PABPC1-203ENST00000517921 UXTQ9UBK9 157 aaPredicted RBP11□□□□□ -0.65
PABPC1-203ENST00000517921 SFMBT1Q9UHJ3 866 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 FZD10Q9ULW2 581 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 AP4E1Q9UPM8 1137 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 HCFC2Q9Y5Z7 792 aa11□□□□□ -0.65
PABPC1-203ENST00000517921 KIF26AQ9ULI4 1882 aaPredicted RBP11□□□□□ -0.65
PABPC1-203ENST00000517921 hCG_1818297A0A087WSY0 165 aa10.99□□□□□ -0.65
PABPC1-203ENST00000517921 PER2O15055 1255 aa10.99□□□□□ -0.65
PABPC1-203ENST00000517921 CCL16O15467 120 aa10.99□□□□□ -0.65
PABPC1-203ENST00000517921 TLR5O60602 858 aa10.99□□□□□ -0.65
PABPC1-203ENST00000517921 ZMYND10O75800 440 aa10.99□□□□□ -0.65
PABPC1-203ENST00000517921 KDELR1P24390 212 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms