RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 DCAF6Q58WW2 860 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 C10orf120Q5SQS8 335 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 TANGO2Q6ICL3 276 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 CYP4V2Q6ZWL3 525 aaPredicted RBP10.32□□□□□ -0.76
CLN8-202ENST00000517514 ARID3BQ8IVW6 561 aaPredicted RBP10.32□□□□□ -0.76
CLN8-202ENST00000517514 ZSCAN18Q8TBC5 510 aaPredicted RBP10.32□□□□□ -0.76
CLN8-202ENST00000517514 SLC35G2Q8TBE7 412 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 FGF14Q92915 247 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 TRIM11Q96F44 468 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 P2RY11Q96G91 374 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 FCRL2Q96LA5 508 aaPredicted RBP10.32□□□□□ -0.76
CLN8-202ENST00000517514 GCNAQ96QF7 691 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 NUP85Q9BW27 656 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 PHF7Q9BWX1 381 aaPredicted RBP10.32□□□□□ -0.76
CLN8-202ENST00000517514 TRPV4Q9HBA0 871 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 PARVAQ9NVD7 372 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.32□□□□□ -0.76
CLN8-202ENST00000517514 GDE1Q9NZC3 331 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 MARCH2Q9P0N8 246 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 THEGQ9P2T0 379 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 EPS15L1Q9UBC2 864 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 DNMT3LQ9UJW3 386 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 ARHGAP26Q9UNA1 814 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 CPQQ9Y646 472 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 TRAV19A0A0A6YYK7 116 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 BTNL10A8MVZ5 291 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 LOC730098B7Z3J9 87 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 ANHXE9PGG2 379 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 IRAK2O43187 625 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 STC2O76061 302 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 TRUB2O95900 331 aaKnown RBP10.31□□□□□ -0.76
CLN8-202ENST00000517514 PTMAP06454 111 aaKnown RBP10.31□□□□□ -0.76
CLN8-202ENST00000517514 TCF4P15884 667 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 TCF3P15923 654 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 PDGFRAP16234 1089 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 GPD1P21695 349 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 GBP2P32456 591 aaPredicted RBP10.31□□□□□ -0.76
CLN8-202ENST00000517514 ATP5C1P36542 298 aaKnown RBP10.31□□□□□ -0.76
CLN8-202ENST00000517514 ZNF143P52747 638 aaPredicted RBP10.31□□□□□ -0.76
CLN8-202ENST00000517514 HADHBP55084 474 aaKnown RBP10.31□□□□□ -0.76
CLN8-202ENST00000517514 HDAC4P56524 1084 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 USP4Q13107 963 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 HTR4Q13639 388 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 SPA17Q15506 151 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 TRIP4Q15650 581 aaPredicted RBP10.31□□□□□ -0.76
CLN8-202ENST00000517514 ZNF77Q15935 545 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 SLC25A52Q3SY17 297 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 ARHGAP15Q53QZ3 475 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 DAB2IPQ5VWQ8 1189 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 PARM1Q6UWI2 310 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 MIB1Q86YT6 1006 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 REXO1L1PQ8IX06 675 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 ZNF564Q8TBZ8 553 aaPredicted RBP10.31□□□□□ -0.76
CLN8-202ENST00000517514 FNIP1Q8TF40 1166 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 CTNNBL1Q8WYA6 563 aaPredicted RBP10.31□□□□□ -0.76
CLN8-202ENST00000517514 RFFLQ8WZ73 363 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 SMARCD2Q92925 531 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 PGAP3Q96FM1 320 aaPredicted RBP10.31□□□□□ -0.76
CLN8-202ENST00000517514 MAGEB5Q9BZ81 275 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 TMPRSS4Q9NRS4 437 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 OLA1Q9NTK5 396 aaKnown RBP10.31□□□□□ -0.76
CLN8-202ENST00000517514 PIGVQ9NUD9 493 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 SMPD4Q9NXE4 827 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 RASAL2Q9UJF2 1139 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 USTQ9Y2C2 406 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.31□□□□□ -0.76
CLN8-202ENST00000517514 SCINQ9Y6U3 715 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 VCANP13611 3396 aa10.31□□□□□ -0.76
CLN8-202ENST00000517514 DOCK4Q8N1I0 1966 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 A0A0A6YYK5 440 aaPredicted RBP10.3□□□□□ -0.76
CLN8-202ENST00000517514 SLC12A8A0AV02 714 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 KCNU1A8MYU2 1149 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 M0QYT0 321 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 LEFTY2O00292 366 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 SCAMP3O14828 347 aaKnown RBP10.3□□□□□ -0.76
CLN8-202ENST00000517514 CKMP06732 381 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 HMBSP08397 361 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 MBL2P11226 248 aaPredicted RBP10.3□□□□□ -0.76
CLN8-202ENST00000517514 CXCR3P49682 368 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 SULT1E1P49888 294 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 ATP11AP98196 1134 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 ZP2Q05996 745 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 PUS10Q3MIT2 529 aaKnown RBP10.3□□□□□ -0.76
CLN8-202ENST00000517514 ZC3H12AQ5D1E8 599 aaKnown RBP10.3□□□□□ -0.76
CLN8-202ENST00000517514 VITQ6UXI7 678 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 Q6ZNB5 142 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 RSRC2Q7L4I2 434 aaKnown RBP10.3□□□□□ -0.76
CLN8-202ENST00000517514 OTOP3Q7RTS5 596 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 ZDHHC14Q8IZN3 488 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 NIPA2Q8N8Q9 360 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 SH3RF2Q8TEC5 729 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 RNF139Q8WU17 664 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 RSAD2Q8WXG1 361 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 ASIC4Q96FT7 647 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 PEBP4Q96S96 227 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 CNPY3Q9BT09 278 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 SLITRK6Q9H5Y7 841 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 TDP1Q9NUW8 608 aa10.3□□□□□ -0.76
CLN8-202ENST00000517514 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.3□□□□□ -0.76
CLN8-202ENST00000517514 CTTNBP2NLQ9P2B4 639 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms