RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 P3H2Q8IVL5 708 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 AMOTL1Q8IY63 956 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 EFCAB13Q8IY85 973 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 UNC5BQ8IZJ1 945 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 CMTM8Q8IZV2 173 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 INPP4AQ96PE3 977 aaPredicted RBP3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 FEM1AQ9BSK4 669 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 SLC46A2Q9BY10 475 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 CLEC4MQ9H2X3 399 aaPredicted RBP3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 BOLA2Q9H3K6 86 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 UCKL1Q9NWZ5 548 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 MIOSQ9NXC5 875 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 CACNG4Q9UBN1 327 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 KCNN3Q9UGI6 736 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 HCN2Q9UL51 889 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 POLHQ9Y253 713 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 BTRCQ9Y297 605 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 PCDHB2Q9Y5E7 798 aa3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 PCDHGA9Q9Y5G4 932 aaKnown RBP3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 MRPS18BQ9Y676 258 aaKnown RBP3.46□□□□□ -1.86
SCARNA13-201ENST00000516672 A0A0A0MRY4 1105 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 PATL2C9JE40 543 aaKnown RBP3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 TMX2-CTNND1H3BSU7 103 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 FIBPO43427 364 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 TLX2O43763 284 aaPredicted RBP3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 EIF5BO60841 1220 aaKnown RBP3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 CSDE1O75534 798 aaKnown RBP3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 IGFBP2P18065 325 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 SCNN1AP37088 669 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 GRIA2P42262 883 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 GLRBP48167 497 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 COMPP49747 757 aaPredicted RBP3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 SCNN1GP51170 649 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 SMSP52788 366 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 BCAT1P54687 386 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 MRPS9P82933 396 aaKnown RBP3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 ERV3-1Q14264 604 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 HSP90AA2PQ14568 343 aaPredicted RBP3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 DRAP1Q14919 205 aaPredicted RBP3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 PCBP2Q15366 365 aaKnown RBP eCLIP3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 ALX1Q15699 326 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 CCDC96Q2M329 555 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 SBK1Q52WX2 424 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 FNDC3BQ53EP0 1204 aaKnown RBP3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 PERM1Q5SV97 790 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 VWA5B1Q5TIE3 1220 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 FAAH2Q6GMR7 532 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 SDE2Q6IQ49 451 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 CTR9Q6PD62 1173 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 APLFQ8IW19 511 aaPredicted RBP3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 RHOT1Q8IXI2 618 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 STK11IPQ8N1F8 1099 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 PLEKHO2Q8TD55 490 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 LRRC15Q8TF66 581 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 RXFP2Q8WXD0 754 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 APPBP2Q92624 585 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 PKNOX2Q96KN3 472 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 STRBPQ96SI9 672 aaKnown RBP3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 ACOX2Q99424 681 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 SH2D3AQ9BRG2 576 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 TRIM56Q9BRZ2 755 aaKnown RBP3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 EFHD1Q9BUP0 239 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 NACAP1Q9BZK3 213 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 LNPKQ9C0E8 428 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 ERVMER34-1Q9H9K5 563 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 ZNF287Q9HBT7 754 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 ARHGEF4Q9NR80 690 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 AASDHPPTQ9NRN7 309 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 HELLSQ9NRZ9 838 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 TDP1Q9NUW8 608 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 TMLHEQ9NVH6 421 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 PLA2G2EQ9NZK7 142 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 TINAGQ9UJW2 476 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 BACE2Q9Y5Z0 518 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 PLXNA2O75051 1894 aa3.45□□□□□ -1.86
SCARNA13-201ENST00000516672 ZNF532Q9HCE3 1301 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 TDRD15B5MCY1 1934 aaKnown RBP3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 NUMA1Q14980 2115 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 A0A087X1B8 175 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 A0A1W2PR77 199 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 ARL5CA6NH57 179 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 ZBTB42B2RXF5 422 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 EPB41L2O43491 1005 aaKnown RBP3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 IGLV3-19P01714 112 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 SRGAP2CP0DJJ0 459 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 ALPPL2P10696 532 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 PCP11498 1178 aaKnown RBP3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 ATP2B1P20020 1258 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 SDSP20132 328 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 DGKAP23743 735 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 CD38P28907 300 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 ACSL1P33121 698 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 AVPR1AP37288 418 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 HARS2P49590 506 aaKnown RBP3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 HSD17B4P51659 736 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 ANTXR2P58335 489 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 SEMA5AQ13591 1074 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 NFYCQ13952 458 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 PTK2BQ14289 1009 aa3.44□□□□□ -1.86
SCARNA13-201ENST00000516672 RBMY1FQ15415 496 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms