RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 ITIH6Q6UXX5 1313 aa27.1■■□□□ 1.93
DDR1-279ENST00000515529 COL4A2P08572 1712 aa27.1■■□□□ 1.93
DDR1-279ENST00000515529 MSI1O43347 362 aaKnown RBP27.09■■□□□ 1.93
DDR1-279ENST00000515529 GRAP2O75791 330 aa27.09■■□□□ 1.93
DDR1-279ENST00000515529 TARSP26639 723 aaKnown RBP27.09■■□□□ 1.93
DDR1-279ENST00000515529 GABRB2P47870 512 aa27.09■■□□□ 1.93
DDR1-279ENST00000515529 VCPP55072 806 aaKnown RBP27.09■■□□□ 1.93
DDR1-279ENST00000515529 KLHL30Q0D2K2 578 aa27.09■■□□□ 1.93
DDR1-279ENST00000515529 DCAF6Q58WW2 860 aa27.09■■□□□ 1.93
DDR1-279ENST00000515529 FAM102AQ5T9C2 384 aaPredicted RBP27.09■■□□□ 1.93
DDR1-279ENST00000515529 IRF2BP2Q7Z5L9 587 aa27.09■■□□□ 1.93
DDR1-279ENST00000515529 DQX1Q8TE96 717 aaKnown RBP27.09■■□□□ 1.93
DDR1-279ENST00000515529 PIWIL1Q96J94 861 aaKnown RBP27.09■■□□□ 1.93
DDR1-279ENST00000515529 AIPL1Q9NZN9 384 aa27.09■■□□□ 1.93
DDR1-279ENST00000515529 LUC7L2Q9Y383 392 aaKnown RBP27.09■■□□□ 1.93
DDR1-279ENST00000515529 FYNP06241 537 aa27.08■■□□□ 1.93
DDR1-279ENST00000515529 TPM1P09493 284 aa27.08■■□□□ 1.93
DDR1-279ENST00000515529 ADH5P11766 374 aa27.08■■□□□ 1.93
DDR1-279ENST00000515529 TBX4P57082 545 aa27.08■■□□□ 1.93
DDR1-279ENST00000515529 CDK17Q00537 523 aa27.08■■□□□ 1.93
DDR1-279ENST00000515529 GAD2Q05329 585 aa27.08■■□□□ 1.93
DDR1-279ENST00000515529 PON2Q15165 354 aa27.08■■□□□ 1.93
DDR1-279ENST00000515529 TAF5Q15542 800 aa27.08■■□□□ 1.93
DDR1-279ENST00000515529 TRIP4Q15650 581 aaPredicted RBP27.08■■□□□ 1.93
DDR1-279ENST00000515529 CLEC16AQ2KHT3 1053 aa27.08■■□□□ 1.93
DDR1-279ENST00000515529 MMS22LQ6ZRQ5 1243 aa27.08■■□□□ 1.93
DDR1-279ENST00000515529 SLC26A9Q7LBE3 791 aa27.08■■□□□ 1.93
DDR1-279ENST00000515529 DENND1CQ8IV53 801 aa27.08■■□□□ 1.93
DDR1-279ENST00000515529 SLC30A5Q8TAD4 765 aa27.08■■□□□ 1.93
DDR1-279ENST00000515529 SPHK2Q9NRA0 654 aa27.08■■□□□ 1.93
DDR1-279ENST00000515529 GOLGA8SH3BPF8 625 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 PI15O43692 258 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 GREM1O60565 184 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 DCNP07585 359 aaKnown RBP27.07■■□□□ 1.92
DDR1-279ENST00000515529 CHKAP35790 457 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 SCNN1AP37088 669 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 RNASE9P60153 205 aaKnown RBP27.07■■□□□ 1.92
DDR1-279ENST00000515529 ZBED6P86452 979 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 GRSF1Q12849 480 aaKnown RBP eCLIP27.07■■□□□ 1.92
DDR1-279ENST00000515529 TRIM14Q14142 442 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 LRRC32Q14392 662 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 ANO4Q32M45 955 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 LY6G5CQ5SRR4 150 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 SYPL2Q5VXT5 272 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 NUGGCQ68CJ6 796 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 SPECC1LQ69YQ0 1117 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 RHBDF2Q6PJF5 856 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 TXNDC11Q6PKC3 985 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 Q6ZNB5 142 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 XYLT1Q86Y38 959 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 UNC45BQ8IWX7 931 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 CCDC105Q8IYK2 499 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 DEFB106AQ8N104 65 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 TMEM105Q8N8V8 129 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 PCDHB18PQ96TA0 734 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 P2RY13Q9BPV8 354 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 C11orf70Q9BRQ4 267 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 TRIM5Q9C035 493 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 FAM204AQ9H8W3 233 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 CAPN11Q9UMQ6 739 aa27.07■■□□□ 1.92
DDR1-279ENST00000515529 MTF2Q9Y483 593 aaPredicted RBP27.07■■□□□ 1.92
DDR1-279ENST00000515529 COL4A3Q01955 1670 aa27.06■■□□□ 1.92
DDR1-279ENST00000515529 DAB1O75553 588 aa27.06■■□□□ 1.92
DDR1-279ENST00000515529 GBP1P32455 592 aa27.06■■□□□ 1.92
DDR1-279ENST00000515529 NNTQ13423 1086 aa27.06■■□□□ 1.92
DDR1-279ENST00000515529 C2CD6Q53TS8 623 aa27.06■■□□□ 1.92
DDR1-279ENST00000515529 TAC4Q86UU9 113 aa27.06■■□□□ 1.92
DDR1-279ENST00000515529 ADAM32Q8TC27 787 aa27.06■■□□□ 1.92
DDR1-279ENST00000515529 SLC2A13Q96QE2 648 aa27.06■■□□□ 1.92
DDR1-279ENST00000515529 HAUS4Q9H6D7 363 aa27.06■■□□□ 1.92
DDR1-279ENST00000515529 ADAM22Q9P0K1 906 aa27.06■■□□□ 1.92
DDR1-279ENST00000515529 AGO1Q9UL18 857 aaKnown RBP27.06■■□□□ 1.92
DDR1-279ENST00000515529 ZDBF2Q9HCK1 2354 aa27.05■■□□□ 1.92
DDR1-279ENST00000515529 TRUB2O95900 331 aaKnown RBP27.05■■□□□ 1.92
DDR1-279ENST00000515529 KLKB1P03952 638 aa27.05■■□□□ 1.92
DDR1-279ENST00000515529 CALB1P05937 261 aa27.05■■□□□ 1.92
DDR1-279ENST00000515529 UNGP13051 313 aaPredicted RBP27.05■■□□□ 1.92
DDR1-279ENST00000515529 MMP8P22894 467 aa27.05■■□□□ 1.92
DDR1-279ENST00000515529 MAGEA9P43362 315 aa27.05■■□□□ 1.92
DDR1-279ENST00000515529 CENPCQ03188 943 aa27.05■■□□□ 1.92
DDR1-279ENST00000515529 RING1Q06587 406 aa27.05■■□□□ 1.92
DDR1-279ENST00000515529 TDRD12Q587J7 1177 aaKnown RBP27.05■■□□□ 1.92
DDR1-279ENST00000515529 PPP1R2P3Q6NXS1 205 aa27.05■■□□□ 1.92
DDR1-279ENST00000515529 TPGS1Q6ZTW0 290 aa27.05■■□□□ 1.92
DDR1-279ENST00000515529 SYN2Q92777 582 aaPredicted RBP27.05■■□□□ 1.92
DDR1-279ENST00000515529 CD101Q93033 1021 aa27.05■■□□□ 1.92
DDR1-279ENST00000515529 WDR35Q9P2L0 1181 aa27.05■■□□□ 1.92
DDR1-279ENST00000515529 TLR6Q9Y2C9 796 aa27.05■■□□□ 1.92
DDR1-279ENST00000515529 HCN4Q9Y3Q4 1203 aa27.05■■□□□ 1.92
DDR1-279ENST00000515529 BZW2Q9Y6E2 419 aaKnown RBP27.05■■□□□ 1.92
DDR1-279ENST00000515529 F5P12259 2224 aa27.05■■□□□ 1.92
DDR1-279ENST00000515529 SHISA7A6NL88 538 aa27.04■■□□□ 1.92
DDR1-279ENST00000515529 TRDMT1O14717 391 aaKnown RBP27.04■■□□□ 1.92
DDR1-279ENST00000515529 GYPCP04921 128 aa27.04■■□□□ 1.92
DDR1-279ENST00000515529 PRKCIP41743 596 aa27.04■■□□□ 1.92
DDR1-279ENST00000515529 SLC11A2P49281 568 aa27.04■■□□□ 1.92
DDR1-279ENST00000515529 DGKKQ5KSL6 1271 aa27.04■■□□□ 1.92
DDR1-279ENST00000515529 VPS36Q86VN1 386 aa27.04■■□□□ 1.92
DDR1-279ENST00000515529 BBS2Q9BXC9 721 aa27.04■■□□□ 1.92
DDR1-279ENST00000515529 RBSNQ9H1K0 784 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms