RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 SETD7Q8WTS6 366 aaKnown RBP16.59■□□□□ 0.25
LMNA-223ENST00000515459 JAKMIP2Q96AA8 810 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 MKRN2Q9H000 416 aaKnown RBP16.59■□□□□ 0.25
LMNA-223ENST00000515459 MIR1-1HGQ9H1L0 117 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 MAGEF1Q9HAY2 307 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.59■□□□□ 0.25
LMNA-223ENST00000515459 KIAA1522Q9P206 1035 aaPredicted RBP16.59■□□□□ 0.25
LMNA-223ENST00000515459 HMGXB4Q9UGU5 601 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 NUDT5Q9UKK9 219 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 SLC27A6Q9Y2P4 619 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 PCDHA5Q9Y5H7 936 aa16.59■□□□□ 0.25
LMNA-223ENST00000515459 NBEAQ8NFP9 2946 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 A0A1W2PQH9 124 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 HHLA1C9JL84 531 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 MDM4O15151 490 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 STC2O76061 302 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 CER1O95813 267 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 RPN1P04843 607 aaKnown RBP16.58■□□□□ 0.24
LMNA-223ENST00000515459 ZNF883P0CG24 379 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 ACO1P21399 889 aaKnown RBP16.58■□□□□ 0.24
LMNA-223ENST00000515459 OXTRP30559 389 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 PSEN1P49768 467 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 COL28A1Q2UY09 1125 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 DCAF12L1Q5VU92 463 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 IL27RAQ6UWB1 636 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 TMPRSS6Q8IU80 811 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 UCMAQ8WVF2 138 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 TAF4BQ92750 862 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 BLZF1Q9H2G9 400 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 GAREM1Q9H706 876 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 NMUR1Q9HB89 426 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 TM7SF3Q9NS93 570 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 THAP10Q9P2Z0 257 aaPredicted RBP16.58■□□□□ 0.24
LMNA-223ENST00000515459 ZNF510Q9Y2H8 683 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 ITPR1Q14643 2758 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 FREM2Q5SZK8 3169 aa16.58■□□□□ 0.24
LMNA-223ENST00000515459 PVALEFA0A1B0GWK0 134 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 METTL12A8MUP2 240 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 KCNJ18B7U540 433 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 BCAT2O15382 392 aaPredicted RBP16.57■□□□□ 0.24
LMNA-223ENST00000515459 PENKP01210 267 aaPredicted RBP16.57■□□□□ 0.24
LMNA-223ENST00000515459 CASP1P29466 404 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 CHKAP35790 457 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 MATKP42679 507 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 IL12RB1P42701 662 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 TPMTP51580 245 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 MFAP3P55082 362 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 ENPP2Q13822 863 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 E2F5Q15329 346 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 ZACNQ401N2 412 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 SOWAHCQ53LP3 525 aaPredicted RBP16.57■□□□□ 0.24
LMNA-223ENST00000515459 SHC4Q6S5L8 630 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 TADA2BQ86TJ2 420 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 ZNF276Q8N554 614 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 MDM1Q8TC05 714 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 PRCCQ92733 491 aaPredicted RBP16.57■□□□□ 0.24
LMNA-223ENST00000515459 SIPA1Q96FS4 1042 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 HNRNPABQ99729 332 aaKnown RBP16.57■□□□□ 0.24
LMNA-223ENST00000515459 IL21RQ9HBE5 538 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 PNPLA8Q9NP80 782 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 NAGPAQ9UK23 515 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 LAMA5O15230 3695 aa16.57■□□□□ 0.24
LMNA-223ENST00000515459 STX6O43752 255 aa16.56■□□□□ 0.24
LMNA-223ENST00000515459 SYNCRIPO60506 623 aaKnown RBP16.56■□□□□ 0.24
LMNA-223ENST00000515459 CUTAO60888 179 aa16.56■□□□□ 0.24
LMNA-223ENST00000515459 CILPO75339 1184 aa16.56■□□□□ 0.24
LMNA-223ENST00000515459 ASS1P00966 412 aaKnown RBP16.56■□□□□ 0.24
LMNA-223ENST00000515459 RALAP11233 206 aa16.56■□□□□ 0.24
LMNA-223ENST00000515459 ACADMP11310 421 aa16.56■□□□□ 0.24
LMNA-223ENST00000515459 ASPAP45381 313 aa16.56■□□□□ 0.24
LMNA-223ENST00000515459 DLG4P78352 724 aa16.56■□□□□ 0.24
LMNA-223ENST00000515459 GEN1Q17RS7 908 aa16.56■□□□□ 0.24
LMNA-223ENST00000515459 FYB2Q5VWT5 728 aa16.56■□□□□ 0.24
LMNA-223ENST00000515459 CYFIP2Q96F07 1278 aa16.56■□□□□ 0.24
LMNA-223ENST00000515459 P2RY11Q96G91 374 aa16.56■□□□□ 0.24
LMNA-223ENST00000515459 ZNF396Q96N95 335 aaPredicted RBP16.56■□□□□ 0.24
LMNA-223ENST00000515459 NUP58Q9BVL2 599 aa16.56■□□□□ 0.24
LMNA-223ENST00000515459 EIF2B4Q9UI10 523 aaKnown RBP16.56■□□□□ 0.24
LMNA-223ENST00000515459 CKAP5Q14008 2032 aa16.56■□□□□ 0.24
LMNA-223ENST00000515459 POLR2DO15514 142 aaKnown RBP16.55■□□□□ 0.24
LMNA-223ENST00000515459 FLRT2O43155 660 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 IGLV3-19P01714 112 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 KLKB1P03952 638 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 KIF11P52732 1056 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 COG7P83436 770 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 HLA-BQ31612 363 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 SPOPLQ6IQ16 392 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 DBX2Q6ZNG2 339 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 SV2AQ7L0J3 742 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 TMPRSS7Q7RTY8 843 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 CCDC186Q7Z3E2 898 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 ANKS1BQ7Z6G8 1248 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 BAHD1Q8TBE0 780 aaPredicted RBP16.55■□□□□ 0.24
LMNA-223ENST00000515459 HNRNPLLQ8WVV9 542 aaKnown RBP16.55■□□□□ 0.24
LMNA-223ENST00000515459 INTS4Q96HW7 963 aaKnown RBP16.55■□□□□ 0.24
LMNA-223ENST00000515459 CDK5RAP1Q96SZ6 601 aaKnown RBP16.55■□□□□ 0.24
LMNA-223ENST00000515459 CDC6Q99741 560 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 NT5C1AQ9BXI3 368 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 DCLK3Q9C098 648 aa16.55■□□□□ 0.24
LMNA-223ENST00000515459 DMAC2Q9NW81 257 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms