RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 CPXM2Q8N436 756 aa13.36□□□□□ -0.27
CLCN3-210ENST00000515420 ATRIPQ8WXE1 791 aa13.36□□□□□ -0.27
CLCN3-210ENST00000515420 NOX5Q96PH1 765 aa13.36□□□□□ -0.27
CLCN3-210ENST00000515420 XPO6Q96QU8 1125 aaKnown RBP13.36□□□□□ -0.27
CLCN3-210ENST00000515420 LSM14BQ9BX40 385 aaKnown RBP13.36□□□□□ -0.27
CLCN3-210ENST00000515420 VPS16Q9H269 839 aa13.36□□□□□ -0.27
CLCN3-210ENST00000515420 ST7Q9NRC1 585 aa13.36□□□□□ -0.27
CLCN3-210ENST00000515420 AJAP1Q9UKB5 411 aaPredicted RBP13.36□□□□□ -0.27
CLCN3-210ENST00000515420 FHOD1Q9Y613 1164 aa13.36□□□□□ -0.27
CLCN3-210ENST00000515420 MYO15AQ9UKN7 3530 aa13.36□□□□□ -0.27
CLCN3-210ENST00000515420 LGALS16A8MUM7 142 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 K7EQS6 105 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 KLKB1P03952 638 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 CORO1AP31146 461 aaKnown RBP13.35□□□□□ -0.27
CLCN3-210ENST00000515420 CNR2P34972 360 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 KRT9P35527 623 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 TNFRSF4P43489 277 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 HARS2P49590 506 aaKnown RBP13.35□□□□□ -0.27
CLCN3-210ENST00000515420 COPB1P53618 953 aaKnown RBP13.35□□□□□ -0.27
CLCN3-210ENST00000515420 MRPS21P82921 87 aaKnown RBP13.35□□□□□ -0.27
CLCN3-210ENST00000515420 RING1Q06587 406 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 ANO4Q32M45 955 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 C12orf40Q86WS4 652 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 CAMKK1Q8N5S9 505 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 KCNV2Q8TDN2 545 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 USP33Q8TEY7 942 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 NDRG1Q92597 394 aaKnown RBP13.35□□□□□ -0.27
CLCN3-210ENST00000515420 EDEM1Q92611 657 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 BBS2Q9BXC9 721 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 STK33Q9BYT3 514 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 IRX2Q9BZI1 471 aaPredicted RBP13.35□□□□□ -0.27
CLCN3-210ENST00000515420 GANQ9H2C0 597 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 HSD3B7Q9H2F3 369 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 ACP6Q9NPH0 428 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 ARHGEF4Q9NR80 690 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 ASNSD1Q9NWL6 643 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 DEC1Q9P2X7 70 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 CYTH4Q9UIA0 394 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 STOML2Q9UJZ1 356 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 AGO1Q9UL18 857 aaKnown RBP13.35□□□□□ -0.27
CLCN3-210ENST00000515420 CEP83Q9Y592 693 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 R4GN57 208 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 USP34Q70CQ2 3546 aa13.35□□□□□ -0.27
CLCN3-210ENST00000515420 MYO18AQ92614 2054 aaKnown RBP13.35□□□□□ -0.27
CLCN3-210ENST00000515420 FAM186AA6NE01 2351 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 E5RJQ4 531 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 NEDD8-MDP1E9PL57 170 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 F8VZ95 297 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 PAPSS1O43252 624 aaPredicted RBP13.34□□□□□ -0.27
CLCN3-210ENST00000515420 GFRA3O60609 400 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 TULP3O75386 442 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 PENKP01210 267 aaPredicted RBP13.34□□□□□ -0.27
CLCN3-210ENST00000515420 IGLV3-27P01718 113 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 LMNAP02545 664 aaKnown RBP13.34□□□□□ -0.27
CLCN3-210ENST00000515420 GLI1P08151 1106 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 TYRP14679 529 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 CDK11BP21127 795 aaKnown RBP13.34□□□□□ -0.27
CLCN3-210ENST00000515420 CDH5P33151 784 aaPredicted RBP13.34□□□□□ -0.27
CLCN3-210ENST00000515420 ANO6Q4KMQ2 910 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 NUGGCQ68CJ6 796 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 PKN3Q6P5Z2 889 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 TSSK4Q6SA08 328 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 SLC47A2Q86VL8 602 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 LONP2Q86WA8 852 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 DENND1CQ8IV53 801 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 UNC45BQ8IWX7 931 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 SCUBE3Q8IX30 993 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 AOPEPQ8N6M6 819 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 TERB1Q8NA31 727 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 RPLP0P6Q8NHW5 317 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 CLEC4CQ8WTT0 213 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 FAM149B1Q96BN6 582 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 SERPINB11Q96P15 392 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 ERGIC2Q96RQ1 377 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 MIS12Q9H081 205 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 EPC1Q9H2F5 836 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 FBXO10Q9UK96 956 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 SLC8A2Q9UPR5 921 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 SIK3Q9Y2K2 1263 aa13.34□□□□□ -0.27
CLCN3-210ENST00000515420 RIF1Q5UIP0 2472 aaKnown RBP13.33□□□□□ -0.28
CLCN3-210ENST00000515420 SMTNL1A8MU46 457 aa13.33□□□□□ -0.28
CLCN3-210ENST00000515420 PIK3R2O00459 728 aa13.33□□□□□ -0.28
CLCN3-210ENST00000515420 CYBBP04839 570 aa13.33□□□□□ -0.28
CLCN3-210ENST00000515420 HMBSP08397 361 aa13.33□□□□□ -0.28
CLCN3-210ENST00000515420 CHRM1P11229 460 aaPredicted RBP13.33□□□□□ -0.28
CLCN3-210ENST00000515420 NCAM1P13591 858 aa13.33□□□□□ -0.28
CLCN3-210ENST00000515420 CYP11B1P15538 503 aa13.33□□□□□ -0.28
CLCN3-210ENST00000515420 KIR2DL1P43626 348 aaPredicted RBP13.33□□□□□ -0.28
CLCN3-210ENST00000515420 SLC6A11P48066 632 aa13.33□□□□□ -0.28
CLCN3-210ENST00000515420 YWHAZP63104 245 aaKnown RBP13.33□□□□□ -0.28
CLCN3-210ENST00000515420 FYB2Q5VWT5 728 aa13.33□□□□□ -0.28
CLCN3-210ENST00000515420 GRAMD4Q6IC98 578 aa13.33□□□□□ -0.28
CLCN3-210ENST00000515420 TPGS1Q6ZTW0 290 aa13.33□□□□□ -0.28
CLCN3-210ENST00000515420 APTXQ7Z2E3 356 aaKnown RBP13.33□□□□□ -0.28
CLCN3-210ENST00000515420 WDR5BQ86VZ2 330 aa13.33□□□□□ -0.28
CLCN3-210ENST00000515420 ZNF677Q86XU0 584 aa13.33□□□□□ -0.28
CLCN3-210ENST00000515420 ZDHHC17Q8IUH5 632 aa13.33□□□□□ -0.28
CLCN3-210ENST00000515420 WDTC1Q8N5D0 677 aa13.33□□□□□ -0.28
CLCN3-210ENST00000515420 IPO4Q8TEX9 1081 aaKnown RBP13.33□□□□□ -0.28
CLCN3-210ENST00000515420 AZIN2Q96A70 460 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms