RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 SGK1O00141 431 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 HOXC11O43248 304 aaPredicted RBP12.02□□□□□ -0.49
VCAN-212ENST00000515397 ATG13O75143 517 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 KLF8O95600 359 aaPredicted RBP12.02□□□□□ -0.49
VCAN-212ENST00000515397 FYNP06241 537 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 GRIA2P42262 883 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 RAPGEF1Q13905 1077 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 SIM2Q14190 667 aaPredicted RBP12.02□□□□□ -0.49
VCAN-212ENST00000515397 FBXO43Q4G163 708 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 TMEM92Q6UXU6 159 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 RBM43Q6ZSC3 357 aaKnown RBP12.02□□□□□ -0.49
VCAN-212ENST00000515397 TADA2BQ86TJ2 420 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 SLC47A2Q86VL8 602 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 LONP2Q86WA8 852 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 KIAA2013Q8IYS2 634 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 WDTC1Q8N5D0 677 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 TXNDC5Q8NBS9 432 aaKnown RBP12.02□□□□□ -0.49
VCAN-212ENST00000515397 ADAM32Q8TC27 787 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 ENOX1Q8TC92 643 aaKnown RBP12.02□□□□□ -0.49
VCAN-212ENST00000515397 SHC3Q92529 594 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 EXOC4Q96A65 974 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 HSFY1Q96LI6 401 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 ACOX2Q99424 681 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 CNGB3Q9NQW8 809 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 TMEM63CQ9P1W3 806 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 NAALADL1Q9UQQ1 740 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 FHOD1Q9Y613 1164 aa12.02□□□□□ -0.49
VCAN-212ENST00000515397 MYO18AQ92614 2054 aaKnown RBP12.01□□□□□ -0.49
VCAN-212ENST00000515397 GTPBP10A4D1E9 387 aaKnown RBP12.01□□□□□ -0.49
VCAN-212ENST00000515397 PRRT4C9JH25 899 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 E5RJQ4 531 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 PAPSS2O95340 614 aaPredicted RBP12.01□□□□□ -0.49
VCAN-212ENST00000515397 LTFP02788 710 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 CISD3P0C7P0 127 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 CLCN1P35523 988 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 KIR2DL1P43626 348 aaPredicted RBP12.01□□□□□ -0.49
VCAN-212ENST00000515397 DGKEP52429 567 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 DRAP1Q14919 205 aaPredicted RBP12.01□□□□□ -0.49
VCAN-212ENST00000515397 KRT31Q15323 416 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 STILQ15468 1287 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 C10orf76Q5T2E6 689 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 CCDC183Q5T5S1 534 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 KLHDC7AQ5VTJ3 777 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 SYPL2Q5VXT5 272 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 GRAMD4Q6IC98 578 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 CEP68Q76N32 757 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 ENOSF1Q7L5Y1 443 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 ZNF276Q8N554 614 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 KIAA1958Q8N8K9 716 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 IL17RCQ8NAC3 791 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 FAM149B1Q96BN6 582 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 PIWIL1Q96J94 861 aaKnown RBP12.01□□□□□ -0.49
VCAN-212ENST00000515397 CDK5RAP1Q96SZ6 601 aaKnown RBP12.01□□□□□ -0.49
VCAN-212ENST00000515397 FAM126AQ9BYI3 521 aaPredicted RBP12.01□□□□□ -0.49
VCAN-212ENST00000515397 TPSD1Q9BZJ3 242 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 EPC1Q9H2F5 836 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 SEMA4AQ9H3S1 761 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 ABCC13Q9NSE7 274 aa12.01□□□□□ -0.49
VCAN-212ENST00000515397 A0A0A0MRY4 1105 aa12□□□□□ -0.49
VCAN-212ENST00000515397 WASH3PC4AMC7 463 aa12□□□□□ -0.49
VCAN-212ENST00000515397 AXIN1O15169 862 aa12□□□□□ -0.49
VCAN-212ENST00000515397 PAPSS1O43252 624 aaPredicted RBP12□□□□□ -0.49
VCAN-212ENST00000515397 MED7O43513 233 aa12□□□□□ -0.49
VCAN-212ENST00000515397 ADAM23O75077 832 aa12□□□□□ -0.49
VCAN-212ENST00000515397 GRAP2O75791 330 aa12□□□□□ -0.49
VCAN-212ENST00000515397 CHRM1P11229 460 aaPredicted RBP12□□□□□ -0.49
VCAN-212ENST00000515397 NCAM1P13591 858 aa12□□□□□ -0.49
VCAN-212ENST00000515397 TNFRSF4P43489 277 aa12□□□□□ -0.49
VCAN-212ENST00000515397 PITX1P78337 314 aaPredicted RBP12□□□□□ -0.49
VCAN-212ENST00000515397 TRIP4Q15650 581 aaPredicted RBP12□□□□□ -0.49
VCAN-212ENST00000515397 CCDC6Q16204 474 aa12□□□□□ -0.49
VCAN-212ENST00000515397 CDKAL1Q5VV42 579 aa12□□□□□ -0.49
VCAN-212ENST00000515397 TAF3Q5VWG9 929 aa12□□□□□ -0.49
VCAN-212ENST00000515397 FYB2Q5VWT5 728 aa12□□□□□ -0.49
VCAN-212ENST00000515397 EGFLAMQ63HQ2 1017 aa12□□□□□ -0.49
VCAN-212ENST00000515397 ANO7Q6IWH7 933 aa12□□□□□ -0.49
VCAN-212ENST00000515397 CAVIN1Q6NZI2 390 aaKnown RBP12□□□□□ -0.49
VCAN-212ENST00000515397 RFWD3Q6PCD5 774 aa12□□□□□ -0.49
VCAN-212ENST00000515397 SYT13Q7L8C5 426 aa12□□□□□ -0.49
VCAN-212ENST00000515397 WDR5BQ86VZ2 330 aa12□□□□□ -0.49
VCAN-212ENST00000515397 TSTD1Q8NFU3 115 aa12□□□□□ -0.49
VCAN-212ENST00000515397 RUBCNQ92622 972 aa12□□□□□ -0.49
VCAN-212ENST00000515397 XPO6Q96QU8 1125 aaKnown RBP12□□□□□ -0.49
VCAN-212ENST00000515397 SLC4A5Q9BY07 1137 aa12□□□□□ -0.49
VCAN-212ENST00000515397 DCLK3Q9C098 648 aa12□□□□□ -0.49
VCAN-212ENST00000515397 ANO10Q9NW15 660 aa12□□□□□ -0.49
VCAN-212ENST00000515397 WDR35Q9P2L0 1181 aa12□□□□□ -0.49
VCAN-212ENST00000515397 NCDNQ9UBB6 729 aa12□□□□□ -0.49
VCAN-212ENST00000515397 GON4LQ3T8J9 2241 aa12□□□□□ -0.49
VCAN-212ENST00000515397 CEP250Q9BV73 2442 aa11.99□□□□□ -0.49
VCAN-212ENST00000515397 SYNJ2BP-COX16A0A087WUM0 186 aa11.99□□□□□ -0.49
VCAN-212ENST00000515397 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.99□□□□□ -0.49
VCAN-212ENST00000515397 EPHB6O15197 1021 aa11.99□□□□□ -0.49
VCAN-212ENST00000515397 CACNG3O60359 315 aa11.99□□□□□ -0.49
VCAN-212ENST00000515397 EEF1GP26641 437 aaKnown RBP11.99□□□□□ -0.49
VCAN-212ENST00000515397 KRT9P35527 623 aa11.99□□□□□ -0.49
VCAN-212ENST00000515397 EIF2DP41214 584 aaKnown RBP11.99□□□□□ -0.49
VCAN-212ENST00000515397 HARS2P49590 506 aaKnown RBP11.99□□□□□ -0.49
VCAN-212ENST00000515397 DGKGP49619 791 aa11.99□□□□□ -0.49
VCAN-212ENST00000515397 SGSHP51688 502 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms