RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 ATXN8OSP0DMR3 200 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 RBL1P28749 1068 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 ZNF200P98182 395 aaPredicted RBP13.02□□□□□ -0.33
SDHA-216ENST00000514027 KCNJ11Q14654 390 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 GRIK4Q16099 956 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 KYAT1Q16773 422 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 CA9Q16790 459 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 RGS9BPQ6ZS82 235 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 TTC30AQ86WT1 665 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 CTAGE3PQ8IX95 158 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 RNF168Q8IYW5 571 aaPredicted RBP13.02□□□□□ -0.33
SDHA-216ENST00000514027 PLD5Q8N7P1 536 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 C7orf31Q8N865 590 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 STK32AQ8WU08 396 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 MZB1Q8WU39 189 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 UCMAQ8WVF2 138 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 PTPRN2Q92932 1015 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 SNRNP25Q9BV90 132 aaKnown RBP13.02□□□□□ -0.33
SDHA-216ENST00000514027 B3GNT5Q9BYG0 378 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 FAM49AQ9H0Q0 323 aaPredicted RBP13.02□□□□□ -0.33
SDHA-216ENST00000514027 SNTG2Q9NY99 539 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 HESX1Q9UBX0 185 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 TUBGCP4Q9UGJ1 667 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 DCTN4Q9UJW0 460 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 HES2Q9Y543 173 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 TRIP11Q15643 1979 aa13.02□□□□□ -0.33
SDHA-216ENST00000514027 IQANK1A0A1B0GTG1 560 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 PEX11AO75192 247 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 DCTN3O75935 186 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 TMCC1O94876 653 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 ENDOD1O94919 500 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 APRTP07741 180 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 TPBGLP0DKB5 382 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 CCNB1P14635 433 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 OLFML1Q6UWY5 402 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 BANPQ8N9N5 519 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 OR6B3Q8NGW1 331 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 ZC3H15Q8WU90 426 aaKnown RBP13.01□□□□□ -0.33
SDHA-216ENST00000514027 C10orf82Q8WW14 230 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 C17orf50Q8WW18 174 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 NCSTNQ92542 709 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 C16orf70Q9BSU1 422 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 APOL6Q9BWW8 343 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 PCDH18Q9HCL0 1135 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 SSU72Q9NP77 194 aaKnown RBP13.01□□□□□ -0.33
SDHA-216ENST00000514027 PAK5Q9P286 719 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 HAO1Q9UJM8 370 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 SBF1O95248 1867 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 SCN1AP35498 2009 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 TMEM221A6NGB7 291 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 HCRTO43612 131 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 FAM155BO75949 473 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 TFE3P19532 575 aaPredicted RBP13.01□□□□□ -0.33
SDHA-216ENST00000514027 GJA5P36382 358 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 GJA8P48165 433 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 SERPINB4P48594 390 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 YWHAZP63104 245 aaKnown RBP13.01□□□□□ -0.33
SDHA-216ENST00000514027 FAAP100Q0VG06 881 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 PDK2Q15119 407 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 MAMDC4Q6UXC1 1216 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 GPRC5AQ8NFJ5 357 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 CCDC110Q8TBZ0 833 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 LZICQ8WZA0 190 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 SLC35B4Q969S0 331 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 TTC17Q96AE7 1141 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 C18orf25Q96B23 403 aaPredicted RBP13.01□□□□□ -0.33
SDHA-216ENST00000514027 SERAC1Q96JX3 654 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 RHBDL2Q9NX52 303 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.01□□□□□ -0.33
SDHA-216ENST00000514027 SUN2Q9UH99 717 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 KIAA1257Q9ULG3 409 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 TEX264Q9Y6I9 313 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 SLC4A7Q9Y6M7 1214 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 PLXNA1Q9UIW2 1896 aa13.01□□□□□ -0.33
SDHA-216ENST00000514027 COL1A2P08123 1366 aa13□□□□□ -0.33
SDHA-216ENST00000514027 TM9SF1O15321 606 aa13□□□□□ -0.33
SDHA-216ENST00000514027 CHADO15335 359 aa13□□□□□ -0.33
SDHA-216ENST00000514027 CCDC166P0CW27 439 aa13□□□□□ -0.33
SDHA-216ENST00000514027 TROVE2P10155 538 aaKnown RBP eCLIP13□□□□□ -0.33
SDHA-216ENST00000514027 IL4RP24394 825 aa13□□□□□ -0.33
SDHA-216ENST00000514027 ADORA2BP29275 332 aa13□□□□□ -0.33
SDHA-216ENST00000514027 GRM5P41594 1212 aa13□□□□□ -0.33
SDHA-216ENST00000514027 SLC6A3Q01959 620 aa13□□□□□ -0.33
SDHA-216ENST00000514027 BOLA3Q53S33 107 aa13□□□□□ -0.33
SDHA-216ENST00000514027 PRPF39Q86UA1 669 aaKnown RBP13□□□□□ -0.33
SDHA-216ENST00000514027 AGGF1Q8N302 714 aaeCLIP13□□□□□ -0.33
SDHA-216ENST00000514027 TTC39CQ8N584 583 aa13□□□□□ -0.33
SDHA-216ENST00000514027 PQLC3Q8N755 202 aa13□□□□□ -0.33
SDHA-216ENST00000514027 PPM1NQ8N819 430 aa13□□□□□ -0.33
SDHA-216ENST00000514027 PCDH19Q8TAB3 1148 aa13□□□□□ -0.33
SDHA-216ENST00000514027 CLEC4CQ8WTT0 213 aa13□□□□□ -0.33
SDHA-216ENST00000514027 ZMAT2Q96NC0 199 aaKnown RBP13□□□□□ -0.33
SDHA-216ENST00000514027 FAM111AQ96PZ2 611 aa13□□□□□ -0.33
SDHA-216ENST00000514027 RAB3IPQ96QF0 476 aaPredicted RBP13□□□□□ -0.33
SDHA-216ENST00000514027 KLC2Q9H0B6 622 aa13□□□□□ -0.33
SDHA-216ENST00000514027 DPEP3Q9H4B8 488 aa13□□□□□ -0.33
SDHA-216ENST00000514027 USP29Q9HBJ7 922 aa13□□□□□ -0.33
SDHA-216ENST00000514027 VTA1Q9NP79 307 aa13□□□□□ -0.33
SDHA-216ENST00000514027 KAT6AQ92794 2004 aa13□□□□□ -0.33
SDHA-216ENST00000514027 A0A0G2JND7 137 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms