RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 KRT82Q9NSB4 513 aa10.39□□□□□ -0.75
CCL28-203ENST00000513525 HMGXB4Q9UGU5 601 aa10.39□□□□□ -0.75
CCL28-203ENST00000513525 LUC7L2Q9Y383 392 aaKnown RBP10.39□□□□□ -0.75
CCL28-203ENST00000513525 CPQQ9Y646 472 aa10.39□□□□□ -0.75
CCL28-203ENST00000513525 PES1O00541 588 aaKnown RBP10.38□□□□□ -0.75
CCL28-203ENST00000513525 AP1G2O75843 785 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 ABL1P00519 1130 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 CYP17A1P05093 508 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 ZDHHC11BP0C7U3 371 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 KRT13P13646 458 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 TRIM21P19474 475 aaKnown RBP10.38□□□□□ -0.75
CCL28-203ENST00000513525 SDHBP21912 280 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 GTF2H1P32780 548 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 OPRD1P41143 372 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 EIF2DP41214 584 aaKnown RBP10.38□□□□□ -0.75
CCL28-203ENST00000513525 LMNB2Q03252 620 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 PPP3CAQ08209 521 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 IFRD2Q12894 506 aaPredicted RBP10.38□□□□□ -0.75
CCL28-203ENST00000513525 ADAM9Q13443 819 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 GAB4Q2WGN9 574 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 NAIF1Q69YI7 327 aaPredicted RBP10.38□□□□□ -0.75
CCL28-203ENST00000513525 HEATR6Q6AI08 1181 aaKnown RBP10.38□□□□□ -0.75
CCL28-203ENST00000513525 PRR23BQ6ZRT6 265 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 SYT13Q7L8C5 426 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 ADGRG2Q8IZP9 1017 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 TTC16Q8NEE8 873 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 ZMIZ2Q8NF64 920 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 CCDC26Q8TAB7 109 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 SCAMP5Q8TAC9 235 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 ACDQ96AP0 544 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 FAXDC2Q96IV6 333 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 SMOQ99835 787 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 EDEM3Q9BZQ6 932 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 TTYH3Q9C0H2 523 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 NDST4Q9H3R1 872 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 CYP3A43Q9HB55 503 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 SLC8A2Q9UPR5 921 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 E2F8A0AVK6 867 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 PRR5-ARHGAP8B1AHC4 643 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 COCHO43405 550 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 BEST1O76090 585 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 TRIM49P0CI25 452 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 TRIM49CP0CI26 452 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 MBL2P11226 248 aaPredicted RBP10.38□□□□□ -0.75
CCL28-203ENST00000513525 CCDC130P13994 396 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 LAMA1P25391 3075 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 GCLMP48507 274 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 ARHGAP8P85298 464 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 ZBED6P86452 979 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 SRSF5Q13243 272 aaKnown RBP10.38□□□□□ -0.75
CCL28-203ENST00000513525 SYCP1Q15431 976 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 MEA1Q16626 185 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 HECTD3Q5T447 861 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 TOGARAM2Q6ZUX3 1019 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 ZNF397Q8NF99 534 aaPredicted RBP10.38□□□□□ -0.75
CCL28-203ENST00000513525 RPLP0P6Q8NHW5 317 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 SLC2A14Q8TDB8 520 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 TAS1R2Q8TE23 839 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 GAB3Q8WWW8 586 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 OTUB2Q96DC9 234 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 HNRNPABQ99729 332 aaKnown RBP10.38□□□□□ -0.75
CCL28-203ENST00000513525 NT5C1AQ9BXI3 368 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 NIF3L1Q9GZT8 377 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 FBXO44Q9H4M3 255 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 FAM124BQ9H5Z6 455 aaPredicted RBP10.38□□□□□ -0.75
CCL28-203ENST00000513525 APOBEC3GQ9HC16 384 aaKnown RBP10.38□□□□□ -0.75
CCL28-203ENST00000513525 TMEM8AQ9HCN3 771 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 PNPLA8Q9NP80 782 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 PARD6AQ9NPB6 346 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 TBC1D14Q9P2M4 693 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 ADGRG1Q9Y653 693 aa10.38□□□□□ -0.75
CCL28-203ENST00000513525 SOWAHDA6NJG2 315 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 CETN3O15182 167 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 CTIFO43310 598 aaKnown RBP10.37□□□□□ -0.75
CCL28-203ENST00000513525 CILPO75339 1184 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 FAM200BP0CF97 657 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 HOXC13P31276 330 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 MAP3K7CLP57077 242 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 CDK17Q00537 523 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 SPEM2Q0P670 501 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 ORC1Q13415 861 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 DHCR24Q15392 516 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 LPAL2Q16609 132 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 RSPO4Q2I0M5 234 aaPredicted RBP10.37□□□□□ -0.75
CCL28-203ENST00000513525 CCDC40Q4G0X9 1142 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 KRT39Q6A163 491 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 TRIM65Q6PJ69 517 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 BLOC1S3Q6QNY0 202 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 RAD9BQ6WBX8 426 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 CLEC20AQ6ZU45 233 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 CEP68Q76N32 757 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 C12orf29Q8N999 325 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 TTC13Q8NBP0 860 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 ZNF592Q92610 1267 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 LOXL4Q96JB6 756 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 TWNKQ96RR1 684 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 TLR8Q9NR97 1041 aaKnown RBP10.37□□□□□ -0.75
CCL28-203ENST00000513525 FAM49BQ9NUQ9 324 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 ZNHIT6Q9NWK9 470 aaKnown RBP10.37□□□□□ -0.75
CCL28-203ENST00000513525 SMPD4Q9NXE4 827 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms