RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 C10orf120Q5SQS8 335 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 SH3PXD2AQ5TCZ1 1133 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 DAAM2Q86T65 1068 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 TAC4Q86UU9 113 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 SYCE1Q8N0S2 351 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 ARFGAP1Q8N6T3 406 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.07□□□□□ -0.32
PDPN-210ENST00000513143 FAM172AQ8WUF8 416 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 TCEAL4Q96EI5 215 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 ALS2CR12Q96Q35 445 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 NCAPGQ9BPX3 1015 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 APOL5Q9BWW9 433 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 PLSCR2Q9NRY7 297 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 TMEM51Q9NW97 253 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 CALCOCO1Q9P1Z2 691 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 DNMT3LQ9UJW3 386 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 CLUHO75153 1309 aa13.07□□□□□ -0.32
PDPN-210ENST00000513143 HELZP42694 1942 aaKnown RBP13.06□□□□□ -0.32
PDPN-210ENST00000513143 MDM4O15151 490 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 LRCH4O75427 683 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 F9P00740 461 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 GJA1P17302 382 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 COMTP21964 271 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 GBP1P32455 592 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 RDXP35241 583 aaKnown RBP13.06□□□□□ -0.32
PDPN-210ENST00000513143 PCK1P35558 622 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 HDAC4P56524 1084 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 DEUP1Q05D60 604 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 NNTQ13423 1086 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 TEAD2Q15562 447 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 CDO1Q16878 200 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 ARHGAP15Q53QZ3 475 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 ZNF569Q5MCW4 686 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 ATAT1Q5SQI0 421 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 TXNDC8Q6A555 127 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 CES5AQ6NT32 575 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 CC2D1AQ6P1N0 951 aaPredicted RBP13.06□□□□□ -0.32
PDPN-210ENST00000513143 EP400NLQ6ZTU2 488 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 CPNE8Q86YQ8 564 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 ADAM32Q8TC27 787 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 UBE2Q2Q8WVN8 375 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 SERPINB11Q96P15 392 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 RNF38Q9H0F5 515 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 GOLPH3Q9H4A6 298 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 FAM204AQ9H8W3 233 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 WDR6Q9NNW5 1121 aaKnown RBP13.06□□□□□ -0.32
PDPN-210ENST00000513143 DDIT4Q9NX09 232 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 MARCH2Q9P0N8 246 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 SFMBT1Q9UHJ3 866 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 ZMYM5Q9UJ78 669 aa13.06□□□□□ -0.32
PDPN-210ENST00000513143 MRPS23Q9Y3D9 190 aaKnown RBP13.06□□□□□ -0.32
PDPN-210ENST00000513143 DENND4AQ7Z401 1863 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 DOCK8Q8NF50 2099 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 TRAV19A0A0A6YYK7 116 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.05□□□□□ -0.32
PDPN-210ENST00000513143 IRAK2O43187 625 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 C7P10643 843 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 HDCP19113 662 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 FSHRP23945 695 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 MIPP30301 263 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 CXCR3P49682 368 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 KPNA1P52294 538 aaPredicted RBP13.05□□□□□ -0.32
PDPN-210ENST00000513143 EFEMP1Q12805 493 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 NME3Q13232 169 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 RAB6CQ53S08 254 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 STXBP5Q5T5C0 1151 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 GPR158Q5T848 1215 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 DAB2IPQ5VWQ8 1189 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 NYAP1Q6ZVC0 841 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 NT5DC3Q86UY8 548 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 ARL14EPQ8N8R7 260 aaPredicted RBP13.05□□□□□ -0.32
PDPN-210ENST00000513143 MAB21L3Q8N8X9 362 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 SMRP1Q8NCR6 262 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 ITFG1Q8TB96 612 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 SLC22A12Q96S37 553 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 CYP2S1Q96SQ9 504 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 SLC46A2Q9BY10 475 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 NACA2Q9H009 215 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 RAB6CQ9H0N0 254 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 TASP1Q9H6P5 420 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 TRPC7Q9HCX4 862 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 PIGVQ9NUD9 493 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.05□□□□□ -0.32
PDPN-210ENST00000513143 CDH22Q9UJ99 828 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 RASAL2Q9UJF2 1139 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 USTQ9Y2C2 406 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 TLR6Q9Y2C9 796 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 HYOU1Q9Y4L1 999 aa13.05□□□□□ -0.32
PDPN-210ENST00000513143 NUP210Q8TEM1 1887 aaPredicted RBP13.05□□□□□ -0.32
PDPN-210ENST00000513143 ESPNB1AK53 854 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 MSI1O43347 362 aaKnown RBP13.04□□□□□ -0.32
PDPN-210ENST00000513143 SPOPO43791 374 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 FTCDO95954 541 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 IGLV3-27P01718 113 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 CEBPBP17676 345 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 MTHFRP42898 656 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 ATXN1P54253 815 aaKnown RBP13.04□□□□□ -0.32
PDPN-210ENST00000513143 TAS2R40P59535 323 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 GNG11P61952 73 aa13.04□□□□□ -0.32
PDPN-210ENST00000513143 SLC7A9P82251 487 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms