RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 APOEP02649 317 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 POU3F3P20264 500 aaPredicted RBP11.31□□□□□ -0.6
PFDN1-204ENST00000512707 GJC1P36383 396 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 AIF1P55008 147 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 OGDHQ02218 1023 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 EFEMP1Q12805 493 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 NNTQ13423 1086 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 C15orf59Q2T9L4 293 aaPredicted RBP11.31□□□□□ -0.6
PFDN1-204ENST00000512707 MEI1Q5TIA1 1274 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 SYPL2Q5VXT5 272 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 CES5AQ6NT32 575 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 KLHDC10Q6PID8 442 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 TMEM184AQ6ZMB5 413 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 POLNQ7Z5Q5 900 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 NT5DC3Q86UY8 548 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 NT5C3BQ969T7 300 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 PGAP3Q96FM1 320 aaPredicted RBP11.31□□□□□ -0.6
PFDN1-204ENST00000512707 NMUR1Q9HB89 426 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 TRPC7Q9HCX4 862 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 DDX56Q9NY93 547 aaKnown RBP11.31□□□□□ -0.6
PFDN1-204ENST00000512707 MARCH2Q9P0N8 246 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 COX16Q9P0S2 106 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 SLC12A6Q9UHW9 1150 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 RASAL2Q9UJF2 1139 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 USP18Q9UMW8 372 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 MYO16Q9Y6X6 1858 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 CHD7Q9P2D1 2997 aa11.31□□□□□ -0.6
PFDN1-204ENST00000512707 TRAV19A0A0A6YYK7 116 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 IRAK2O43187 625 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 LRCH4O75427 683 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 F11P03951 625 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 FYNP06241 537 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 RHOP08100 348 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 TCP1P17987 556 aaKnown RBP11.3□□□□□ -0.6
PFDN1-204ENST00000512707 CTNNA2P26232 953 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 MIPP30301 263 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 CCR1P32246 355 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 CTNNA1P35221 906 aaKnown RBP11.3□□□□□ -0.6
PFDN1-204ENST00000512707 EPHA5P54756 1037 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 RWDD2BP57060 319 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 COG7P83436 770 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 ITIH3Q06033 890 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 ZNF252P-AS1Q0IIN9 211 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 CLUL1Q15846 466 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 BOLA3Q53S33 107 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 EFHC2Q5JST6 749 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 TJAP1Q5JTD0 557 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 BRMS1LQ5PSV4 323 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 RARS2Q5T160 578 aaKnown RBP11.3□□□□□ -0.6
PFDN1-204ENST00000512707 ACBD5Q5T8D3 534 aaPredicted RBP11.3□□□□□ -0.6
PFDN1-204ENST00000512707 TRNP1Q6NT89 227 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 ANKRD54Q6NXT1 300 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 TMC5Q6UXY8 1006 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 EP400NLQ6ZTU2 488 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 TAC4Q86UU9 113 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 MIB1Q86YT6 1006 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 TMC8Q8IU68 726 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 PSTKQ8IV42 348 aaKnown RBP11.3□□□□□ -0.6
PFDN1-204ENST00000512707 MAP7D3Q8IWC1 876 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 MICALL1Q8N3F8 863 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 ADAM32Q8TC27 787 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 CENPIQ92674 756 aaPredicted RBP11.3□□□□□ -0.6
PFDN1-204ENST00000512707 HES6Q96HZ4 224 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 WDR24Q96S15 920 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 GOLPH3Q9H4A6 298 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 SLITRK6Q9H5Y7 841 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 WDCPQ9H6R7 721 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 CCSER2Q9H7U1 834 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 ZWILCHQ9H900 591 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 ZNF334Q9HCZ1 680 aaPredicted RBP11.3□□□□□ -0.6
PFDN1-204ENST00000512707 PCSK1NQ9UHG2 260 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 TLR6Q9Y2C9 796 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 HBS1LQ9Y450 684 aaKnown RBP11.3□□□□□ -0.6
PFDN1-204ENST00000512707 HYOU1Q9Y4L1 999 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 MTCH2Q9Y6C9 303 aa11.3□□□□□ -0.6
PFDN1-204ENST00000512707 A0A1W2PRU2 124 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 SLC12A8A0AV02 714 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 C19orf67A6NJJ6 358 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 ENC1O14682 589 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 COCHO43405 550 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 ENDOD1O94919 500 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 CKMP06732 381 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 MBL2P11226 248 aaPredicted RBP11.29□□□□□ -0.6
PFDN1-204ENST00000512707 HDCP19113 662 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 GTF2F1P35269 517 aaKnown RBP eCLIP11.29□□□□□ -0.6
PFDN1-204ENST00000512707 AVPR1AP37288 418 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 DNA2P51530 1060 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 HDAC4P56524 1084 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 TBX4P57082 545 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 ADAM15Q13444 863 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 TUBB2AQ13885 445 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 KCNC3Q14003 757 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 PPP2R5DQ14738 602 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 TRIP4Q15650 581 aaPredicted RBP11.29□□□□□ -0.6
PFDN1-204ENST00000512707 SEL1L2Q5TEA6 688 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 NUGGCQ68CJ6 796 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 GRASPQ7Z6J2 395 aaPredicted RBP11.29□□□□□ -0.6
PFDN1-204ENST00000512707 FAM131BQ86XD5 332 aa11.29□□□□□ -0.6
PFDN1-204ENST00000512707 DDX42Q86XP3 938 aaKnown RBP eCLIP11.29□□□□□ -0.6
PFDN1-204ENST00000512707 UNC45BQ8IWX7 931 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms