RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CCSER2Q9H7U1 834 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 ASCL3Q9NQ33 180 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 MARK1Q9P0L2 795 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 THAP10Q9P2Z0 257 aaPredicted RBP9.68□□□□□ -0.86
NUP54-211ENST00000512151 SRPK3Q9UPE1 567 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 AGAP1Q9UPQ3 857 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 PAXBP1Q9Y5B6 917 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 UTP20O75691 2785 aaKnown RBP9.68□□□□□ -0.86
NUP54-211ENST00000512151 MYH10P35580 1976 aa9.68□□□□□ -0.86
NUP54-211ENST00000512151 SPTBN1Q01082 2364 aaKnown RBP9.68□□□□□ -0.86
NUP54-211ENST00000512151 HUS1O60921 280 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 DXOO77932 396 aaKnown RBP9.67□□□□□ -0.86
NUP54-211ENST00000512151 FSBPO95073 299 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 PLCG1P19174 1290 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 ACO1P21399 889 aaKnown RBP9.67□□□□□ -0.86
NUP54-211ENST00000512151 CD27P26842 260 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 PCSK1P29120 753 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 CCR10P46092 362 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 DGKGP49619 791 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 GABREP78334 506 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 IFRD2Q12894 506 aaPredicted RBP9.67□□□□□ -0.86
NUP54-211ENST00000512151 BNIP3Q12983 259 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 KANSL1Q7Z3B3 1105 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 HSCBQ8IWL3 235 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 TMEM86AQ8N2M4 240 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 C1orf127Q8N9H9 656 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 KBTBD7Q8WVZ9 684 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 KCNN1Q92952 543 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 BHMTQ93088 406 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 SLC6A18Q96N87 628 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 XPO6Q96QU8 1125 aaKnown RBP9.67□□□□□ -0.86
NUP54-211ENST00000512151 PLK2Q9NYY3 685 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 CHORDC1Q9UHD1 332 aaPredicted RBP9.67□□□□□ -0.86
NUP54-211ENST00000512151 NME7Q9Y5B8 376 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 ICE1Q9Y2F5 2266 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 BOD1L1Q8NFC6 3051 aa9.67□□□□□ -0.86
NUP54-211ENST00000512151 A0A1W2PNU3 283 aaPredicted RBP9.66□□□□□ -0.86
NUP54-211ENST00000512151 WNT9AO14904 365 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 VILLO15195 856 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 EFSO43281 561 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 DFNA5O60443 496 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 ITGB3P05106 788 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 IGHV4-34P06331 123 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 ACADMP11310 421 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 CKMT2P17540 419 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 ABCB4P21439 1286 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 ANXA13P27216 316 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 EPHA8P29322 1005 aaPredicted RBP9.66□□□□□ -0.86
NUP54-211ENST00000512151 CYP27A1Q02318 531 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 ILKQ13418 452 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 GEN1Q17RS7 908 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 TDRD10Q5VZ19 366 aaKnown RBP9.66□□□□□ -0.86
NUP54-211ENST00000512151 C4orf50Q6ZRC1 276 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 LIMS2Q7Z4I7 341 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 ADAT2Q7Z6V5 191 aaKnown RBP9.66□□□□□ -0.86
NUP54-211ENST00000512151 IGSF22Q8N9C0 903 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 RBBP8NLQ8NC74 664 aaPredicted RBP9.66□□□□□ -0.86
NUP54-211ENST00000512151 ZSWIM2Q8NEG5 633 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 SORCS1Q8WY21 1168 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 PCED1BQ96HM7 432 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 C8orf48Q96LL4 319 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 CEP295NLQ96MC4 621 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 PSMG3-AS1Q96PY0 264 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 TIPINQ9BVW5 301 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 DPH1Q9BZG8 443 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 EBF2Q9HAK2 575 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 GDAP2Q9NXN4 497 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 SIX4Q9UIU6 781 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 FBXO10Q9UK96 956 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 MAN2B2Q9Y2E5 1009 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 SNX9Q9Y5X1 595 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 RELNP78509 3460 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 C2CD3Q4AC94 2353 aa9.66□□□□□ -0.86
NUP54-211ENST00000512151 PTPRJQ12913 1337 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 SYNCRIPO60506 623 aaKnown RBP9.65□□□□□ -0.86
NUP54-211ENST00000512151 SEMA4FO95754 770 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 PDGFRBP09619 1106 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 PNPLA4P41247 253 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 LSSP48449 732 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 LHX1P48742 406 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 C21orf59P57076 290 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 ERVPABLB-1P60509 514 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 SKOR1P84550 965 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 TLE1Q04724 770 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 SERINC3Q13530 473 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 ZNF234Q14588 700 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 IL17AQ16552 155 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 PROX2Q3B8N5 592 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 ARSHQ5FYA8 562 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 HECTD3Q5T447 861 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 SFMBT2Q5VUG0 894 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 CDCP2Q5VXM1 449 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 HTR3DQ70Z44 454 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 TOP6BLQ8N6T0 577 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 WASF1Q92558 559 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 LLPHQ9BRT6 129 aaKnown RBP9.65□□□□□ -0.86
NUP54-211ENST00000512151 LHX5Q9H2C1 402 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 WDR35Q9P2L0 1181 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 ADAMTS1Q9UHI8 967 aa9.65□□□□□ -0.86
NUP54-211ENST00000512151 CDH9Q9ULB4 789 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms