RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 NEMP1O14524 444 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 NOL4O94818 638 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 CETPP11597 493 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 CACNA2D1P54289 1103 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 OAZ1P54368 228 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 GTF2BQ00403 316 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 PPATQ06203 517 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 DGKDQ16760 1214 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 AGBL2Q5U5Z8 902 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 ZNF57Q68EA5 555 aaPredicted RBP11.17□□□□□ -0.62
CPNE4-209ENST00000512055 FAM71DQ8N9W8 422 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 CNDP1Q96KN2 507 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 TNIP3Q96KP6 325 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 KLF6Q99612 283 aaPredicted RBP11.17□□□□□ -0.62
CPNE4-209ENST00000512055 CNPY3Q9BT09 278 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 PDGFDQ9GZP0 370 aaPredicted RBP11.17□□□□□ -0.62
CPNE4-209ENST00000512055 C6orf62Q9GZU0 229 aaPredicted RBP11.17□□□□□ -0.62
CPNE4-209ENST00000512055 LRFN2Q9ULH4 789 aa11.17□□□□□ -0.62
CPNE4-209ENST00000512055 TMEM120BA0PK00 339 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 GAS2O43903 313 aaKnown RBP11.16□□□□□ -0.62
CPNE4-209ENST00000512055 CYP2C8P10632 490 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 S100A1P23297 94 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 YY1P25490 414 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 PTENP60484 403 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 ARF3P61204 181 aaPredicted RBP11.16□□□□□ -0.62
CPNE4-209ENST00000512055 ARF1P84077 181 aaKnown RBP11.16□□□□□ -0.62
CPNE4-209ENST00000512055 POTEAQ6S8J7 498 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 CATSPERGQ6ZRH7 1159 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 TERB1Q8NA31 727 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 FAM45AQ8TCE6 357 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 AENQ8WTP8 325 aaKnown RBP11.16□□□□□ -0.62
CPNE4-209ENST00000512055 ZNF606Q8WXB4 792 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 SIPA1Q96FS4 1042 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 ZCWPW1Q9H0M4 648 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 DPP3Q9NY33 737 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 COL20A1Q9P218 1284 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 ZNF212Q9UDV6 495 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 PEX10O60683 326 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 MOCS2O96007 188 aaPredicted RBP11.16□□□□□ -0.62
CPNE4-209ENST00000512055 RALBP11234 206 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 INSRRP14616 1297 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 UBA1P22314 1058 aaKnown RBP11.16□□□□□ -0.62
CPNE4-209ENST00000512055 TALDO1P37837 337 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 MTTPP55157 894 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 SYTL3Q4VX76 610 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 EFHC2Q5JST6 749 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 IKBIPQ70UQ0 350 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 ABRAQ8N0Z2 381 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 ASAP3Q8TDY4 903 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 VPS50Q96JG6 964 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 PARK7Q99497 189 aaKnown RBP11.16□□□□□ -0.62
CPNE4-209ENST00000512055 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.16□□□□□ -0.62
CPNE4-209ENST00000512055 XPO7Q9UIA9 1087 aaKnown RBP11.16□□□□□ -0.62
CPNE4-209ENST00000512055 IGLV3-22A0A075B6J6 115 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 PROSCO94903 275 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 PSMC3P17980 439 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 EPHX2P34913 555 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 CPA2P48052 419 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 SESN2P58004 480 aaPredicted RBP11.16□□□□□ -0.62
CPNE4-209ENST00000512055 CCNIQ14094 377 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 NFIL3Q16649 462 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 BMT2Q1RMZ1 405 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 DDI2Q5TDH0 399 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 HGSNATQ68CP4 663 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 ATG14Q6ZNE5 492 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 ACOT1Q86TX2 421 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 C11orf74Q86VG3 221 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 WDR48Q8TAF3 677 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 RSPH1Q8WYR4 309 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 CAVIN3Q969G5 261 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 ZFP42Q96MM3 310 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 MMADHCQ9H3L0 296 aaPredicted RBP11.16□□□□□ -0.62
CPNE4-209ENST00000512055 SEMA4AQ9H3S1 761 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 PLEKHA5Q9HAU0 1116 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 RPRD1BQ9NQG5 326 aaKnown RBP11.16□□□□□ -0.62
CPNE4-209ENST00000512055 MARCOQ9UEW3 520 aaPredicted RBP11.16□□□□□ -0.62
CPNE4-209ENST00000512055 MOSPD1Q9UJG1 213 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 MAP2K7O14733 419 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 ARIH2O95376 493 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 MMP14P50281 582 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 DNAJC3Q13217 504 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 PTGISQ16647 500 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 PDZK1Q5T2W1 519 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 CCSAPQ6IQ19 270 aaPredicted RBP11.16□□□□□ -0.62
CPNE4-209ENST00000512055 C11orf63Q6NUN7 778 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 MOB2Q70IA6 237 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 CCDC33Q8N5R6 958 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 SCG3Q8WXD2 468 aaKnown RBP11.16□□□□□ -0.62
CPNE4-209ENST00000512055 FRMD6Q96NE9 622 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 AGAP3Q96P47 875 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 PCDHGB4Q9UN71 923 aa11.16□□□□□ -0.62
CPNE4-209ENST00000512055 TRIM43BA6NCK2 446 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 CENPXA8MT69 81 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 IRF6O14896 467 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 CELF2O95319 508 aaKnown RBP11.15□□□□□ -0.62
CPNE4-209ENST00000512055 PTGS2P35354 604 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 ZNF157P51786 506 aaPredicted RBP11.15□□□□□ -0.62
CPNE4-209ENST00000512055 CDH8P55286 799 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 CENPCQ03188 943 aa11.15□□□□□ -0.62
CPNE4-209ENST00000512055 RRP1BQ14684 758 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms