RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 PASD1Q8IV76 773 aa17.25■□□□□ 0.35
DDX41-213ENST00000512027 ALLCQ8N6M5 410 aa17.25■□□□□ 0.35
DDX41-213ENST00000512027 ENOX1Q8TC92 643 aaKnown RBP17.25■□□□□ 0.35
DDX41-213ENST00000512027 RNF139Q8WU17 664 aa17.25■□□□□ 0.35
DDX41-213ENST00000512027 ABCC13Q9NSE7 274 aa17.25■□□□□ 0.35
DDX41-213ENST00000512027 DNAJC17Q9NVM6 304 aaKnown RBP17.25■□□□□ 0.35
DDX41-213ENST00000512027 FHOD1Q9Y613 1164 aa17.25■□□□□ 0.35
DDX41-213ENST00000512027 KLF8O95600 359 aaPredicted RBP17.24■□□□□ 0.35
DDX41-213ENST00000512027 LTFP02788 710 aa17.24■□□□□ 0.35
DDX41-213ENST00000512027 HNRNPLP14866 589 aaKnown RBP eCLIP17.24■□□□□ 0.35
DDX41-213ENST00000512027 GRIA2P42262 883 aa17.24■□□□□ 0.35
DDX41-213ENST00000512027 C10orf76Q5T2E6 689 aa17.24■□□□□ 0.35
DDX41-213ENST00000512027 CDKAL1Q5VV42 579 aa17.24■□□□□ 0.35
DDX41-213ENST00000512027 SASS6Q6UVJ0 657 aa17.24■□□□□ 0.35
DDX41-213ENST00000512027 SYT13Q7L8C5 426 aa17.24■□□□□ 0.35
DDX41-213ENST00000512027 WDR5BQ86VZ2 330 aa17.24■□□□□ 0.35
DDX41-213ENST00000512027 SCUBE3Q8IX30 993 aa17.24■□□□□ 0.35
DDX41-213ENST00000512027 SCML4Q8N228 414 aa17.24■□□□□ 0.35
DDX41-213ENST00000512027 TXNDC5Q8NBS9 432 aaKnown RBP17.24■□□□□ 0.35
DDX41-213ENST00000512027 ACDQ96AP0 544 aa17.24■□□□□ 0.35
DDX41-213ENST00000512027 HSFY1Q96LI6 401 aa17.24■□□□□ 0.35
DDX41-213ENST00000512027 LSM14BQ9BX40 385 aaKnown RBP17.24■□□□□ 0.35
DDX41-213ENST00000512027 VPS16Q9H269 839 aa17.24■□□□□ 0.35
DDX41-213ENST00000512027 MARK1Q9P0L2 795 aa17.24■□□□□ 0.35
DDX41-213ENST00000512027 TMEM63CQ9P1W3 806 aa17.24■□□□□ 0.35
DDX41-213ENST00000512027 DEC1Q9P2X7 70 aa17.24■□□□□ 0.35
DDX41-213ENST00000512027 HCN2Q9UL51 889 aa17.24■□□□□ 0.35
DDX41-213ENST00000512027 SPAG17Q6Q759 2223 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 TBC1D3BA6NDS4 549 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.23■□□□□ 0.35
DDX41-213ENST00000512027 E5RJQ4 531 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 SGK1O00141 431 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 FOXN3O00409 490 aaPredicted RBP17.23■□□□□ 0.35
DDX41-213ENST00000512027 MED7O43513 233 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 CACNG3O60359 315 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 MBD3O95983 291 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 EEF1GP26641 437 aaKnown RBP17.23■□□□□ 0.35
DDX41-213ENST00000512027 KIR2DL1P43626 348 aaPredicted RBP17.23■□□□□ 0.35
DDX41-213ENST00000512027 KLK7P49862 253 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 RAPGEF1Q13905 1077 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 SIM2Q14190 667 aaPredicted RBP17.23■□□□□ 0.35
DDX41-213ENST00000512027 KRT31Q15323 416 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 CCDC183Q5T5S1 534 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 GRAMD4Q6IC98 578 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 TMEM92Q6UXU6 159 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 TERB1Q8NA31 727 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 IL17RCQ8NAC3 791 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 IRGQQ8WZA9 623 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 PLD4Q96BZ4 506 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 ERLEC1Q96DZ1 483 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 PIWIL1Q96J94 861 aaKnown RBP17.23■□□□□ 0.35
DDX41-213ENST00000512027 PLCB1Q9NQ66 1216 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 OLA1Q9NTK5 396 aaKnown RBP17.23■□□□□ 0.35
DDX41-213ENST00000512027 FANCLQ9NW38 375 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 NCDNQ9UBB6 729 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 MMP17Q9ULZ9 603 aa17.23■□□□□ 0.35
DDX41-213ENST00000512027 PAPSS1O43252 624 aaPredicted RBP17.22■□□□□ 0.35
DDX41-213ENST00000512027 TSPAN3O60637 253 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 FYNP06241 537 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 HOXA6P31267 233 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 CLCN1P35523 988 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 WASP42768 502 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 RPL34P49207 117 aaKnown RBP17.22■□□□□ 0.35
DDX41-213ENST00000512027 PDCLQ13371 301 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 TRIP4Q15650 581 aaPredicted RBP17.22■□□□□ 0.35
DDX41-213ENST00000512027 STX1AQ16623 288 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 CT47A1Q5JQC4 288 aaPredicted RBP17.22■□□□□ 0.35
DDX41-213ENST00000512027 FYB2Q5VWT5 728 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 MSANTD2Q6P1R3 559 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 SLC47A2Q86VL8 602 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 KIAA2013Q8IYS2 634 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 WDTC1Q8N5D0 677 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 ADAM32Q8TC27 787 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 RUBCNQ92622 972 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 FAM149B1Q96BN6 582 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 FAM81BQ96LP2 452 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 SLC4A5Q9BY07 1137 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 TPSD1Q9BZJ3 242 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 DCLK3Q9C098 648 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 CLEC4EQ9ULY5 219 aa17.22■□□□□ 0.35
DDX41-213ENST00000512027 A0A0A0MRY4 1105 aa17.21■□□□□ 0.35
DDX41-213ENST00000512027 PRRT4C9JH25 899 aa17.21■□□□□ 0.35
DDX41-213ENST00000512027 ADAM23O75077 832 aa17.21■□□□□ 0.35
DDX41-213ENST00000512027 FBXO21O94952 628 aa17.21■□□□□ 0.35
DDX41-213ENST00000512027 CISD3P0C7P0 127 aa17.21■□□□□ 0.35
DDX41-213ENST00000512027 DGKGP49619 791 aa17.21■□□□□ 0.35
DDX41-213ENST00000512027 MRPS21P82921 87 aaKnown RBP17.21■□□□□ 0.35
DDX41-213ENST00000512027 DRAP1Q14919 205 aaPredicted RBP17.21■□□□□ 0.35
DDX41-213ENST00000512027 KLHDC7AQ5VTJ3 777 aa17.21■□□□□ 0.35
DDX41-213ENST00000512027 EGFLAMQ63HQ2 1017 aa17.21■□□□□ 0.35
DDX41-213ENST00000512027 ANO7Q6IWH7 933 aa17.21■□□□□ 0.35
DDX41-213ENST00000512027 CEP68Q76N32 757 aa17.21■□□□□ 0.35
DDX41-213ENST00000512027 ZNF513Q8N8E2 541 aaPredicted RBP17.21■□□□□ 0.35
DDX41-213ENST00000512027 C1orf131Q8NDD1 294 aaKnown RBP17.21■□□□□ 0.35
DDX41-213ENST00000512027 TSTD1Q8NFU3 115 aa17.21■□□□□ 0.35
DDX41-213ENST00000512027 DQX1Q8TE96 717 aaKnown RBP17.21■□□□□ 0.35
DDX41-213ENST00000512027 XPO6Q96QU8 1125 aaKnown RBP17.21■□□□□ 0.35
DDX41-213ENST00000512027 CPXM1Q96SM3 734 aa17.21■□□□□ 0.35
DDX41-213ENST00000512027 ACOX2Q99424 681 aa17.21■□□□□ 0.35
DDX41-213ENST00000512027 ANO10Q9NW15 660 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms