RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ACADMP11310 421 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 CCNA2P20248 432 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 EEF1GP26641 437 aaKnown RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 EEF1DP29692 281 aaKnown RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 PITPNBP48739 271 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 CCR5P51681 352 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 GDF10P55107 478 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 PSMC6P62333 389 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 SUMO1P63165 101 aaKnown RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 NOP14P78316 857 aaKnown RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 RNASELQ05823 741 aaKnown RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 STK4Q13043 487 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 KYNUQ16719 465 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 KLHL40Q2TBA0 621 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 CERKLQ49MI3 558 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 FLYWCH1Q4VC44 716 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 TOR1AIP1Q5JTV8 583 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 C12orf60Q5U649 245 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 THOC7Q6I9Y2 204 aaKnown RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 OR7E24Q6IFN5 339 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 CENPPQ6IPU0 288 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 KLHDC10Q6PID8 442 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 C6orf89Q6UWU4 347 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 UBE2R2Q712K3 238 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 REC114Q7Z4M0 266 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 RASAL3Q86YV0 1011 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 TUSC5Q8IXB3 177 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 PHC2Q8IXK0 858 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 ARL14Q8N4G2 192 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 TMEM145Q8NBT3 493 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 FBXO18Q8NFZ0 1043 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 GIMAP7Q8NHV1 300 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 SPATA20Q8TB22 786 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 GANCQ8TET4 914 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 BCL7CQ8WUZ0 217 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 CUL5Q93034 780 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 NXPE3Q969Y0 559 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 SIPA1Q96FS4 1042 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 MYO19Q96H55 970 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 PRRX2Q99811 253 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 AARSD1Q9BTE6 412 aaKnown RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 LRFN3Q9BTN0 628 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 KIFC3Q9BVG8 833 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 FTOQ9C0B1 505 aaKnown RBP eCLIP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 OPA3Q9H6K4 179 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 SARS2Q9NP81 518 aaKnown RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 NRIP3Q9NQ35 241 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 AGPAT3Q9NRZ7 376 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 SLC35D1Q9NTN3 355 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 GJB4Q9NTQ9 266 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 MOCS1Q9NZB8 636 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 ARPP21Q9UBL0 812 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 VAV3Q9UKW4 847 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 SNX6Q9UNH7 406 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 TIMM22Q9Y584 194 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 FAM169AQ9Y6X4 670 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 MYH7P12883 1935 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 ATRNL1Q5VV63 1379 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 BLACEA4D250 179 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 AQP12BA6NM10 295 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 DCDC2CA8MYV0 355 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 EIF3CLB5ME19 914 aaKnown RBP5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 STX16-NPEPL1H3BU86 382 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 PGRMC2O15173 223 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 TP73O15350 636 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 SULT1B1O43704 296 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 TBC1D4O60343 1298 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 PHF2O75151 1096 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 ATP6V1G1O75348 118 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 KLHL2O95198 593 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 ALDH2P05091 517 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 ABCB1P08183 1280 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 INHBAP08476 426 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 EPB41P11171 864 aaKnown RBP5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 CDK4P11802 303 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 CTNNA2P26232 953 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 TTKP33981 857 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 SHMT1P34896 483 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 SCTRP47872 440 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 CDK8P49336 464 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 LUMP51884 338 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 RAD23AP54725 363 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 TPM4P67936 248 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 FKBP1BP68106 108 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 KIF23Q02241 960 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 PPARAQ07869 468 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZNF543Q08ER8 600 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 GRIK3Q13003 919 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 SPP2Q13103 211 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 DPYSL2Q16555 572 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 SMU1Q2TAY7 513 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 FBXO43Q4G163 708 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 TRAT1Q6PIZ9 186 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 KRT25Q7Z3Z0 450 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 TSPYL5Q86VY4 417 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 SLC9A9Q8IVB4 645 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 DPP10Q8N608 796 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 BANPQ8N9N5 519 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 SMYD1Q8NB12 490 aa5.23□□□□□ -1.57
TRAPPC11-208ENST00000511955 GLIS3Q8NEA6 775 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms