RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ATXN7O15265 892 aaPredicted RBP20.07■□□□□ 0.8
HMGCS1-206ENST00000511774 AP1G2O75843 785 aa20.07■□□□□ 0.8
HMGCS1-206ENST00000511774 BMP15O95972 392 aa20.07■□□□□ 0.8
HMGCS1-206ENST00000511774 CCDC130P13994 396 aa20.07■□□□□ 0.8
HMGCS1-206ENST00000511774 PRKCHP24723 683 aa20.07■□□□□ 0.8
HMGCS1-206ENST00000511774 MFAP3P55082 362 aa20.07■□□□□ 0.8
HMGCS1-206ENST00000511774 ORC1Q13415 861 aa20.07■□□□□ 0.8
HMGCS1-206ENST00000511774 IL27RAQ6UWB1 636 aa20.07■□□□□ 0.8
HMGCS1-206ENST00000511774 FAM124AQ86V42 546 aa20.07■□□□□ 0.8
HMGCS1-206ENST00000511774 RBBP8NLQ8NC74 664 aaPredicted RBP20.07■□□□□ 0.8
HMGCS1-206ENST00000511774 CCDC127Q96BQ5 260 aa20.07■□□□□ 0.8
HMGCS1-206ENST00000511774 SIPA1Q96FS4 1042 aa20.07■□□□□ 0.8
HMGCS1-206ENST00000511774 TMX3Q96JJ7 454 aa20.07■□□□□ 0.8
HMGCS1-206ENST00000511774 PANK2Q9BZ23 570 aa20.07■□□□□ 0.8
HMGCS1-206ENST00000511774 C6orf106Q9H6K1 298 aaPredicted RBP20.07■□□□□ 0.8
HMGCS1-206ENST00000511774 NMUR1Q9HB89 426 aa20.07■□□□□ 0.8
HMGCS1-206ENST00000511774 CLEC4EQ9ULY5 219 aa20.07■□□□□ 0.8
HMGCS1-206ENST00000511774 TGFB1I1O43294 461 aa20.06■□□□□ 0.8
HMGCS1-206ENST00000511774 TNFSF14O43557 240 aa20.06■□□□□ 0.8
HMGCS1-206ENST00000511774 KLKB1P03952 638 aa20.06■□□□□ 0.8
HMGCS1-206ENST00000511774 TNNI1P19237 187 aa20.06■□□□□ 0.8
HMGCS1-206ENST00000511774 CYP24A1Q07973 514 aa20.06■□□□□ 0.8
HMGCS1-206ENST00000511774 STARD3Q14849 445 aa20.06■□□□□ 0.8
HMGCS1-206ENST00000511774 PSMD6Q15008 389 aa20.06■□□□□ 0.8
HMGCS1-206ENST00000511774 SNRNP35Q16560 246 aaKnown RBP20.06■□□□□ 0.8
HMGCS1-206ENST00000511774 PLEKHO2Q8TD55 490 aa20.06■□□□□ 0.8
HMGCS1-206ENST00000511774 SORCS1Q8WY21 1168 aa20.06■□□□□ 0.8
HMGCS1-206ENST00000511774 SMARCD1Q96GM5 515 aa20.06■□□□□ 0.8
HMGCS1-206ENST00000511774 CYLDQ9NQC7 956 aa20.06■□□□□ 0.8
HMGCS1-206ENST00000511774 HMGXB4Q9UGU5 601 aa20.06■□□□□ 0.8
HMGCS1-206ENST00000511774 SLC27A6Q9Y2P4 619 aa20.06■□□□□ 0.8
HMGCS1-206ENST00000511774 CYP26A1O43174 497 aa20.05■□□□□ 0.8
HMGCS1-206ENST00000511774 STAU1O95793 577 aaKnown RBP20.05■□□□□ 0.8
HMGCS1-206ENST00000511774 PENKP01210 267 aaPredicted RBP20.05■□□□□ 0.8
HMGCS1-206ENST00000511774 ZNF234Q14588 700 aa20.05■□□□□ 0.8
HMGCS1-206ENST00000511774 FYB2Q5VWT5 728 aa20.05■□□□□ 0.8
HMGCS1-206ENST00000511774 TMEM215Q68D42 235 aa20.05■□□□□ 0.8
HMGCS1-206ENST00000511774 SCARA5Q6ZMJ2 495 aa20.05■□□□□ 0.8
HMGCS1-206ENST00000511774 ACOT1Q86TX2 421 aa20.05■□□□□ 0.8
HMGCS1-206ENST00000511774 COMMD8Q9NX08 183 aa20.05■□□□□ 0.8
HMGCS1-206ENST00000511774 CCDC39Q9UFE4 941 aa20.05■□□□□ 0.8
HMGCS1-206ENST00000511774 PLXNA2O75051 1894 aa20.05■□□□□ 0.8
HMGCS1-206ENST00000511774 HHLA1C9JL84 531 aa20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 H0Y8X5 98 aa20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 TK2O00142 265 aa20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 CBX4O00257 560 aa20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 STC2O76061 302 aa20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 OXTRP30559 389 aa20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 ACSL1P33121 698 aa20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 ATP5C1P36542 298 aaKnown RBP20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 CASP4P49662 377 aa20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 MAP3K7CLP57077 242 aa20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 IL9RQ01113 521 aa20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 PCSK4Q6UW60 755 aa20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 ZNF843Q8N446 348 aa20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 SNX19Q92543 992 aa20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 PIWIL1Q96J94 861 aaKnown RBP20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 NUP58Q9BVL2 599 aa20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 CSNK1G1Q9HCP0 422 aa20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 TM9SF3Q9HD45 589 aa20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 TLR8Q9NR97 1041 aaKnown RBP20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 LSM7Q9UK45 103 aaKnown RBP20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 ANKRD6Q9Y2G4 727 aa20.04■□□□□ 0.8
HMGCS1-206ENST00000511774 ATP8B3O60423 1300 aa20.03■□□□□ 0.8
HMGCS1-206ENST00000511774 ARID1BQ8NFD5 2236 aaPredicted RBP20.03■□□□□ 0.8
HMGCS1-206ENST00000511774 COL6A6A6NMZ7 2263 aa20.03■□□□□ 0.8
HMGCS1-206ENST00000511774 CLIC2O15247 247 aa20.03■□□□□ 0.8
HMGCS1-206ENST00000511774 EIF2S3P41091 472 aaKnown RBP20.03■□□□□ 0.8
HMGCS1-206ENST00000511774 AFF3P51826 1226 aaKnown RBP20.03■□□□□ 0.8
HMGCS1-206ENST00000511774 EPM2AIP1Q7L775 607 aaPredicted RBP20.03■□□□□ 0.8
HMGCS1-206ENST00000511774 SLC2A14Q8TDB8 520 aa20.03■□□□□ 0.8
HMGCS1-206ENST00000511774 PRCCQ92733 491 aaPredicted RBP20.03■□□□□ 0.8
HMGCS1-206ENST00000511774 ORAI3Q9BRQ5 295 aa20.03■□□□□ 0.8
HMGCS1-206ENST00000511774 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.03■□□□□ 0.8
HMGCS1-206ENST00000511774 AGPAT3Q9NRZ7 376 aa20.03■□□□□ 0.8
HMGCS1-206ENST00000511774 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.03■□□□□ 0.8
HMGCS1-206ENST00000511774 SRPRBQ9Y5M8 271 aaKnown RBP20.03■□□□□ 0.8
HMGCS1-206ENST00000511774 COL5A1P20908 1838 aaPredicted RBP20.02■□□□□ 0.8
HMGCS1-206ENST00000511774 A0A1W2PQH9 124 aa20.02■□□□□ 0.8
HMGCS1-206ENST00000511774 PCDHGA12O60330 932 aa20.02■□□□□ 0.8
HMGCS1-206ENST00000511774 HLA-EP13747 358 aa20.02■□□□□ 0.8
HMGCS1-206ENST00000511774 GRK6P43250 576 aa20.02■□□□□ 0.8
HMGCS1-206ENST00000511774 CYP2J2P51589 502 aa20.02■□□□□ 0.8
HMGCS1-206ENST00000511774 SUZ12Q15022 739 aaKnown RBP20.02■□□□□ 0.8
HMGCS1-206ENST00000511774 BRAPQ7Z569 592 aa20.02■□□□□ 0.8
HMGCS1-206ENST00000511774 SCD5Q86SK9 330 aa20.02■□□□□ 0.8
HMGCS1-206ENST00000511774 C12orf29Q8N999 325 aa20.02■□□□□ 0.8
HMGCS1-206ENST00000511774 JAKMIP2Q96AA8 810 aa20.02■□□□□ 0.8
HMGCS1-206ENST00000511774 KIAA1586Q9HCI6 787 aa20.02■□□□□ 0.8
HMGCS1-206ENST00000511774 FAM49BQ9NUQ9 324 aa20.02■□□□□ 0.8
HMGCS1-206ENST00000511774 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.02■□□□□ 0.8
HMGCS1-206ENST00000511774 SCML2Q9UQR0 700 aa20.02■□□□□ 0.8
HMGCS1-206ENST00000511774 SYNCRIPO60506 623 aaKnown RBP20.01■□□□□ 0.79
HMGCS1-206ENST00000511774 VNN1O95497 513 aa20.01■□□□□ 0.79
HMGCS1-206ENST00000511774 RARGP13631 454 aa20.01■□□□□ 0.79
HMGCS1-206ENST00000511774 STAT6P42226 847 aa20.01■□□□□ 0.79
HMGCS1-206ENST00000511774 TRPC3Q13507 836 aa20.01■□□□□ 0.79
HMGCS1-206ENST00000511774 LARP1BQ659C4 914 aaKnown RBP20.01■□□□□ 0.79
HMGCS1-206ENST00000511774 FAM173BQ6P4H8 233 aa20.01■□□□□ 0.79
HMGCS1-206ENST00000511774 FBXO44Q9H4M3 255 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms