RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 FOXJ2Q9P0K8 574 aa3.92□□□□□ -1.78
TRAPPC11-207ENST00000511409 PACSIN3Q9UKS6 424 aa3.92□□□□□ -1.78
TRAPPC11-207ENST00000511409 DGKBQ9Y6T7 804 aa3.92□□□□□ -1.78
TRAPPC11-207ENST00000511409 WDR33Q9C0J8 1336 aaKnown RBP3.92□□□□□ -1.78
TRAPPC11-207ENST00000511409 KIF28PB7ZC32 967 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 FOXN1O15353 648 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 CBFA2T3O75081 653 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 RPP40O75818 363 aaKnown RBP3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 RHOBTB3O94955 611 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 FGAP02671 866 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 MYCLP12524 364 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 ALADP13716 330 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 VEGFAP15692 232 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 KRT4P19013 534 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 DRD4P21917 467 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 CCT5P48643 541 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 RARRES1P49788 294 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 DIO1P49895 249 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 COPB1P53618 953 aaKnown RBP3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 INHBCP55103 352 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 PSG6Q00889 435 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 RNASELQ05823 741 aaKnown RBP3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 CCDC15Q0P6D6 951 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 LMAN2Q12907 356 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 AASDHQ4L235 1098 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 AARS2Q5JTZ9 985 aaKnown RBP3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 ZNF569Q5MCW4 686 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 ANKRD40Q6AI12 368 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 MSANTD2Q6P1R3 559 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 MTHFD1LQ6UB35 978 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 PCSK4Q6UW60 755 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 KIRREL2Q6UWL6 708 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 Q6ZPA2 131 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 PIK3AP1Q6ZUJ8 805 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 RAB11FIP2Q7L804 512 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 ZNF804AQ7Z570 1209 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 MRGPRGQ86SM5 289 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 LDLRAD3Q86YD5 345 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 STT3BQ8TCJ2 826 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 OTUD7AQ8TE49 926 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 SLC22A17Q8WUG5 538 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 HMGB4Q8WW32 186 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 CTHRC1Q96CG8 243 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 MCRS1Q96EZ8 462 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 PDLIM2Q96JY6 352 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 HS6ST2Q96MM7 605 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 ISCA1Q9BUE6 129 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 CINPQ9BW66 212 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 CIPCQ9C0C6 399 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 PABPC3Q9H361 631 aaKnown RBP3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 CCDC134Q9H6E4 229 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 CPNE5Q9HCH3 593 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 SEPSECSQ9HD40 501 aaKnown RBP3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 SAYSD1Q9NPB0 183 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 KIF17Q9P2E2 1029 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 ING1Q9UK53 422 aaPredicted RBP3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 PCDHB7Q9Y5E2 793 aa3.91□□□□□ -1.78
TRAPPC11-207ENST00000511409 A0A087X1B8 175 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 CCDC189A1A4V9 331 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 EFCAB8A8MWE9 144 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 KRT38O76015 456 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 HNRNPCP07910 306 aaKnown RBP eCLIP3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 TMIGD3P0DMS9 266 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 MMP8P22894 467 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 THBS4P35443 961 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 MAPK9P45984 424 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 ARL4CP56559 192 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 SF3A3Q12874 501 aaKnown RBP eCLIP3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 PPFIA1Q13136 1202 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 CBFBQ13951 182 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 KCNJ12Q14500 433 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 TMEM95Q3KNT9 176 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 C4orf46Q504U0 113 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 TANGO2Q6ICL3 276 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 NFRKBQ6P4R8 1299 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 SERPINA13PQ6UXR4 307 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 TRABD2AQ86V40 505 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 ANKRD18AQ8IVF6 992 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 SFTPA1Q8IWL2 248 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 SUGP1Q8IWZ8 645 aaKnown RBP3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 CLASRPQ8N2M8 674 aaKnown RBP3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 PNPLA1Q8N8W4 532 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 TERB1Q8NA31 727 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 AFG1LQ8WV93 481 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 OVCA2Q8WZ82 227 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 CPT1BQ92523 772 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 RSC1A1Q92681 617 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 GOLGA1Q92805 767 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 DAZAP1Q96EP5 407 aaKnown RBP3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 PRR11Q96HE9 360 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 REXO5Q96IC2 774 aaKnown RBP3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 ZSCAN31Q96LW9 406 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 MMS19Q96T76 1030 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 MACROD1Q9BQ69 325 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 DUSP26Q9BV47 211 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 VPS16Q9H269 839 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 SAP30LQ9HAJ7 183 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 PRDM8Q9NQV8 689 aa3.9□□□□□ -1.79
TRAPPC11-207ENST00000511409 ASB6Q9NWX5 421 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms