RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 LRRC71Q8N4P6 559 aa8□□□□□ -1.13
USP53-206ENST00000510737 R3HDM4Q96D70 268 aa8□□□□□ -1.13
USP53-206ENST00000510737 PTDSS2Q9BVG9 487 aa8□□□□□ -1.13
USP53-206ENST00000510737 NPC1L1Q9UHC9 1359 aa7.99□□□□□ -1.13
USP53-206ENST00000510737 SCN7AQ01118 1682 aa7.99□□□□□ -1.13
USP53-206ENST00000510737 A1L4Q6 167 aa7.99□□□□□ -1.13
USP53-206ENST00000510737 IKBKBO14920 756 aa7.99□□□□□ -1.13
USP53-206ENST00000510737 UNC5CO95185 931 aa7.99□□□□□ -1.13
USP53-206ENST00000510737 ONECUT2O95948 504 aa7.99□□□□□ -1.13
USP53-206ENST00000510737 A1BGP04217 495 aa7.99□□□□□ -1.13
USP53-206ENST00000510737 PPIFP30405 207 aaKnown RBP7.99□□□□□ -1.13
USP53-206ENST00000510737 IL6STP40189 918 aaPredicted RBP7.99□□□□□ -1.13
USP53-206ENST00000510737 PXNP49023 591 aaPredicted RBP7.99□□□□□ -1.13
USP53-206ENST00000510737 EMC10Q5UCC4 262 aa7.99□□□□□ -1.13
USP53-206ENST00000510737 FCRL6Q6DN72 434 aa7.99□□□□□ -1.13
USP53-206ENST00000510737 RGS7BPQ6MZT1 257 aaPredicted RBP7.99□□□□□ -1.13
USP53-206ENST00000510737 ZC3H10Q96K80 434 aaKnown RBP7.99□□□□□ -1.13
USP53-206ENST00000510737 CNOT7Q9UIV1 285 aaKnown RBP7.99□□□□□ -1.13
USP53-206ENST00000510737 ANKRD26Q9UPS8 1709 aa7.98□□□□□ -1.13
USP53-206ENST00000510737 RNMTO43148 476 aaKnown RBP7.98□□□□□ -1.13
USP53-206ENST00000510737 PDE8BO95263 885 aa7.98□□□□□ -1.13
USP53-206ENST00000510737 ATXN1LP0C7T5 689 aaKnown RBP7.98□□□□□ -1.13
USP53-206ENST00000510737 CCND1P24385 295 aa7.98□□□□□ -1.13
USP53-206ENST00000510737 PDE1AP54750 535 aa7.98□□□□□ -1.13
USP53-206ENST00000510737 AWAT2Q6E213 333 aa7.98□□□□□ -1.13
USP53-206ENST00000510737 Q6ZWC4 215 aa7.98□□□□□ -1.13
USP53-206ENST00000510737 ASB2Q96Q27 587 aa7.98□□□□□ -1.13
USP53-206ENST00000510737 GTPBP4Q9BZE4 634 aaKnown RBP7.98□□□□□ -1.13
USP53-206ENST00000510737 VPS16Q9H269 839 aa7.98□□□□□ -1.13
USP53-206ENST00000510737 ANLNQ9NQW6 1124 aa7.98□□□□□ -1.13
USP53-206ENST00000510737 NDRG4Q9ULP0 352 aaKnown RBP7.98□□□□□ -1.13
USP53-206ENST00000510737 PAPPA2Q9BXP8 1791 aa7.97□□□□□ -1.13
USP53-206ENST00000510737 hCG_1984214I3L0E3 225 aa7.97□□□□□ -1.13
USP53-206ENST00000510737 TCERG1O14776 1098 aaKnown RBP7.97□□□□□ -1.13
USP53-206ENST00000510737 PPIP5K2O43314 1243 aa7.97□□□□□ -1.13
USP53-206ENST00000510737 RECQLP46063 649 aaPredicted RBP7.97□□□□□ -1.13
USP53-206ENST00000510737 TM4SF4P48230 202 aa7.97□□□□□ -1.13
USP53-206ENST00000510737 IQCB1Q15051 598 aa7.97□□□□□ -1.13
USP53-206ENST00000510737 TRIM72Q6ZMU5 477 aa7.97□□□□□ -1.13
USP53-206ENST00000510737 PARS2Q7L3T8 475 aaKnown RBP7.97□□□□□ -1.13
USP53-206ENST00000510737 THAP7Q9BT49 309 aaPredicted RBP7.97□□□□□ -1.13
USP53-206ENST00000510737 GLOD4Q9HC38 313 aa7.97□□□□□ -1.13
USP53-206ENST00000510737 MRPS17Q9Y2R5 130 aaKnown RBP7.97□□□□□ -1.13
USP53-206ENST00000510737 CYP2D7A0A087X1C5 515 aa7.96□□□□□ -1.14
USP53-206ENST00000510737 CSF1RP07333 972 aa7.96□□□□□ -1.14
USP53-206ENST00000510737 NR4A2P43354 598 aa7.96□□□□□ -1.14
USP53-206ENST00000510737 SOX8P57073 446 aa7.96□□□□□ -1.14
USP53-206ENST00000510737 CRY2Q49AN0 593 aa7.96□□□□□ -1.14
USP53-206ENST00000510737 KIRREL2Q6UWL6 708 aa7.96□□□□□ -1.14
USP53-206ENST00000510737 LAYNQ6UX15 382 aa7.96□□□□□ -1.14
USP53-206ENST00000510737 CLEC4GQ6UXB4 293 aa7.96□□□□□ -1.14
USP53-206ENST00000510737 RP9Q8TA86 221 aaKnown RBP7.96□□□□□ -1.14
USP53-206ENST00000510737 FAM167AQ96KS9 214 aa7.96□□□□□ -1.14
USP53-206ENST00000510737 LENG8Q96PV6 779 aaPredicted RBP7.96□□□□□ -1.14
USP53-206ENST00000510737 WACQ9BTA9 647 aa7.96□□□□□ -1.14
USP53-206ENST00000510737 PRO3102Q9H379 93 aa7.96□□□□□ -1.14
USP53-206ENST00000510737 PCDHA6Q9UN73 950 aa7.96□□□□□ -1.14
USP53-206ENST00000510737 VCANP13611 3396 aa7.95□□□□□ -1.14
USP53-206ENST00000510737 ALG1L2C9J202 215 aa7.95□□□□□ -1.14
USP53-206ENST00000510737 H3BUI4 141 aa7.95□□□□□ -1.14
USP53-206ENST00000510737 DTNBO60941 627 aa7.95□□□□□ -1.14
USP53-206ENST00000510737 TJP3O95049 919 aa7.95□□□□□ -1.14
USP53-206ENST00000510737 NPSP0C0P6 89 aa7.95□□□□□ -1.14
USP53-206ENST00000510737 TNNT2P45379 298 aaPredicted RBP7.95□□□□□ -1.14
USP53-206ENST00000510737 RABEP1Q15276 862 aa7.95□□□□□ -1.14
USP53-206ENST00000510737 PGS1Q32NB8 556 aa7.95□□□□□ -1.14
USP53-206ENST00000510737 SULT6B1Q6IMI4 303 aa7.95□□□□□ -1.14
USP53-206ENST00000510737 SLC35A4Q96G79 324 aa7.95□□□□□ -1.14
USP53-206ENST00000510737 TRIM17Q9Y577 477 aa7.95□□□□□ -1.14
USP53-206ENST00000510737 AKAP11Q9UKA4 1901 aa7.94□□□□□ -1.14
USP53-206ENST00000510737 BCAR3O75815 825 aa7.94□□□□□ -1.14
USP53-206ENST00000510737 GRPP07492 148 aa7.94□□□□□ -1.14
USP53-206ENST00000510737 PIP4K2AP48426 406 aaPredicted RBP7.94□□□□□ -1.14
USP53-206ENST00000510737 FHL1Q13642 323 aa7.94□□□□□ -1.14
USP53-206ENST00000510737 Q4G0T1 1027 aa7.94□□□□□ -1.14
USP53-206ENST00000510737 RNF187Q5TA31 235 aaPredicted RBP7.94□□□□□ -1.14
USP53-206ENST00000510737 MOB2Q70IA6 237 aa7.94□□□□□ -1.14
USP53-206ENST00000510737 ZNF280BQ86YH2 543 aa7.94□□□□□ -1.14
USP53-206ENST00000510737 CNGA4Q8IV77 575 aa7.94□□□□□ -1.14
USP53-206ENST00000510737 PLBD2Q8NHP8 589 aa7.94□□□□□ -1.14
USP53-206ENST00000510737 XAGE5Q8WWM1 108 aa7.94□□□□□ -1.14
USP53-206ENST00000510737 DCPSQ96C86 337 aaKnown RBP7.94□□□□□ -1.14
USP53-206ENST00000510737 TEX13AQ9BXU3 409 aaPredicted RBP7.94□□□□□ -1.14
USP53-206ENST00000510737 VPS33BQ9H267 617 aa7.94□□□□□ -1.14
USP53-206ENST00000510737 TUBA8Q9NY65 449 aaPredicted RBP7.94□□□□□ -1.14
USP53-206ENST00000510737 GABRQQ9UN88 632 aa7.94□□□□□ -1.14
USP53-206ENST00000510737 NIP7Q9Y221 180 aaKnown RBP eCLIP7.94□□□□□ -1.14
USP53-206ENST00000510737 CDHR2Q9BYE9 1310 aa7.94□□□□□ -1.14
USP53-206ENST00000510737 LAMA3Q16787 3333 aa7.93□□□□□ -1.14
USP53-206ENST00000510737 YDJCA8MPS7 323 aa7.93□□□□□ -1.14
USP53-206ENST00000510737 MMP13P45452 471 aa7.93□□□□□ -1.14
USP53-206ENST00000510737 FOXG1P55316 489 aaPredicted RBP7.93□□□□□ -1.14
USP53-206ENST00000510737 TNIP1Q15025 636 aa7.93□□□□□ -1.14
USP53-206ENST00000510737 ZIK1Q3SY52 487 aaPredicted RBP7.93□□□□□ -1.14
USP53-206ENST00000510737 TMEM240Q5SV17 173 aa7.93□□□□□ -1.14
USP53-206ENST00000510737 BRIX1Q8TDN6 353 aaKnown RBP7.93□□□□□ -1.14
USP53-206ENST00000510737 WASF1Q92558 559 aa7.93□□□□□ -1.14
USP53-206ENST00000510737 CDCA5Q96FF9 252 aa7.93□□□□□ -1.14
USP53-206ENST00000510737 RTFDC1Q9BY42 306 aaPredicted RBP7.93□□□□□ -1.14
USP53-206ENST00000510737 KLHL13Q9P2N7 655 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms