RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, human

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNF8-208	ENST00000510195	BCKDHB	P21953	392 aa		27.95	■■■□□ 2.06
SNF8-208	ENST00000510195	PDE4C	Q08493	712 aa		27.95	■■■□□ 2.06
SNF8-208	ENST00000510195	GOLGA7B	Q2TAP0	167 aa		27.95	■■■□□ 2.06
SNF8-208	ENST00000510195	RSRC2	Q7L4I2	434 aa	Known RBP	27.95	■■■□□ 2.06
SNF8-208	ENST00000510195	CYP2U1	Q7Z449	544 aa		27.95	■■■□□ 2.06
SNF8-208	ENST00000510195	SMOC1	Q9H4F8	434 aa		27.95	■■■□□ 2.06
SNF8-208	ENST00000510195	ZDHHC4	Q9NPG8	344 aa		27.95	■■■□□ 2.06
SNF8-208	ENST00000510195	MARCH2	Q9P0N8	246 aa		27.95	■■■□□ 2.06
SNF8-208	ENST00000510195	SLC27A6	Q9Y2P4	619 aa		27.95	■■■□□ 2.06
SNF8-208	ENST00000510195	BICDL2	A1A5D9	508 aa		27.94	■■■□□ 2.06
SNF8-208	ENST00000510195	MAP3K13	O43283	966 aa		27.94	■■■□□ 2.06
SNF8-208	ENST00000510195	PENK	P01210	267 aa	Predicted RBP	27.94	■■■□□ 2.06
SNF8-208	ENST00000510195	PAEP	P09466	180 aa		27.94	■■■□□ 2.06
SNF8-208	ENST00000510195	SETSIP	P0DME0	302 aa		27.94	■■■□□ 2.06
SNF8-208	ENST00000510195	MAP7D1	Q3KQU3	841 aa		27.94	■■■□□ 2.06
SNF8-208	ENST00000510195	RNF43	Q68DV7	783 aa		27.94	■■■□□ 2.06
SNF8-208	ENST00000510195	CHPF	Q8IZ52	775 aa		27.94	■■■□□ 2.06
SNF8-208	ENST00000510195	SCML4	Q8N228	414 aa		27.94	■■■□□ 2.06
SNF8-208	ENST00000510195	PGBD3	Q8N328	593 aa		27.94	■■■□□ 2.06
SNF8-208	ENST00000510195	KCTD13	Q8WZ19	329 aa		27.94	■■■□□ 2.06
SNF8-208	ENST00000510195	GABRG3	Q99928	467 aa		27.94	■■■□□ 2.06
SNF8-208	ENST00000510195	LRRC4	Q9HBW1	653 aa		27.94	■■■□□ 2.06
SNF8-208	ENST00000510195	PRRT4	C9JH25	899 aa		27.93	■■■□□ 2.06
SNF8-208	ENST00000510195	KHNYN	O15037	678 aa	Known RBP	27.93	■■■□□ 2.06
SNF8-208	ENST00000510195	NPC1	O15118	1278 aa		27.93	■■■□□ 2.06
SNF8-208	ENST00000510195	CD19	P15391	556 aa		27.93	■■■□□ 2.06
SNF8-208	ENST00000510195	CD44	P16070	742 aa	Known RBP	27.93	■■■□□ 2.06
SNF8-208	ENST00000510195	CORO1A	P31146	461 aa	Known RBP	27.93	■■■□□ 2.06
SNF8-208	ENST00000510195	DHPS	P49366	369 aa	Predicted RBP	27.93	■■■□□ 2.06
SNF8-208	ENST00000510195	E2F5	Q15329	346 aa		27.93	■■■□□ 2.06
SNF8-208	ENST00000510195	CCDC40	Q4G0X9	1142 aa		27.93	■■■□□ 2.06
SNF8-208	ENST00000510195	EGFLAM	Q63HQ2	1017 aa		27.93	■■■□□ 2.06
SNF8-208	ENST00000510195	TTI2	Q6NXR4	508 aa		27.93	■■■□□ 2.06
SNF8-208	ENST00000510195	CPXM2	Q8N436	756 aa		27.93	■■■□□ 2.06
SNF8-208	ENST00000510195	RLN3	Q8WXF3	142 aa		27.93	■■■□□ 2.06
SNF8-208	ENST00000510195	PLD4	Q96BZ4	506 aa		27.93	■■■□□ 2.06
SNF8-208	ENST00000510195	NT5C1B	Q96P26	610 aa		27.93	■■■□□ 2.06
SNF8-208	ENST00000510195	ULBP1	Q9BZM6	244 aa		27.93	■■■□□ 2.06
SNF8-208	ENST00000510195	AGO1	Q9UL18	857 aa	Known RBP	27.93	■■■□□ 2.06
SNF8-208	ENST00000510195	TPR	P12270	2363 aa	Known RBP	27.92	■■■□□ 2.06
SNF8-208	ENST00000510195		A0A1W2PQF6	199 aa		27.92	■■■□□ 2.06
SNF8-208	ENST00000510195	ZNF217	O75362	1048 aa		27.92	■■■□□ 2.06
SNF8-208	ENST00000510195	FYB2	Q5VWT5	728 aa		27.92	■■■□□ 2.06
SNF8-208	ENST00000510195	ISM2	Q6H9L7	571 aa		27.92	■■■□□ 2.06
SNF8-208	ENST00000510195	TCEAL6	Q6IPX3	200 aa		27.92	■■■□□ 2.06
SNF8-208	ENST00000510195	LCLAT1	Q6UWP7	414 aa		27.92	■■■□□ 2.06
SNF8-208	ENST00000510195	SLC36A4	Q6YBV0	504 aa		27.92	■■■□□ 2.06
SNF8-208	ENST00000510195	TOGARAM2	Q6ZUX3	1019 aa		27.92	■■■□□ 2.06
SNF8-208	ENST00000510195	TCEAL3	Q969E4	200 aa		27.92	■■■□□ 2.06
SNF8-208	ENST00000510195	IPO9	Q96P70	1041 aa	Known RBP	27.92	■■■□□ 2.06
SNF8-208	ENST00000510195	EDEM2	Q9BV94	578 aa		27.92	■■■□□ 2.06
SNF8-208	ENST00000510195	LSM14B	Q9BX40	385 aa	Known RBP	27.92	■■■□□ 2.06
SNF8-208	ENST00000510195	PPP1R3G	B7ZBB8	358 aa		27.91	■■■□□ 2.06
SNF8-208	ENST00000510195		O00370	1275 aa		27.91	■■■□□ 2.06
SNF8-208	ENST00000510195	GNA14	O95837	355 aa		27.91	■■■□□ 2.06
SNF8-208	ENST00000510195	CYBB	P04839	570 aa		27.91	■■■□□ 2.06
SNF8-208	ENST00000510195	GABRG2	P18507	467 aa		27.91	■■■□□ 2.06
SNF8-208	ENST00000510195	ZNF132	P52740	706 aa		27.91	■■■□□ 2.06
SNF8-208	ENST00000510195	LRMP	Q12912	555 aa		27.91	■■■□□ 2.06
SNF8-208	ENST00000510195	MORC3	Q14149	939 aa		27.91	■■■□□ 2.06
SNF8-208	ENST00000510195	STIL	Q15468	1287 aa		27.91	■■■□□ 2.06
SNF8-208	ENST00000510195	PKDCC	Q504Y2	493 aa		27.91	■■■□□ 2.06
SNF8-208	ENST00000510195	CD248	Q9HCU0	757 aa		27.91	■■■□□ 2.06
SNF8-208	ENST00000510195	CNGB3	Q9NQW8	809 aa		27.91	■■■□□ 2.06
SNF8-208	ENST00000510195	EVL	Q9UI08	416 aa	Predicted RBP	27.91	■■■□□ 2.06
SNF8-208	ENST00000510195	MBD1	Q9UIS9	605 aa	Predicted RBP	27.91	■■■□□ 2.06
SNF8-208	ENST00000510195	CIZ1	Q9ULV3	898 aa	Predicted RBP	27.91	■■■□□ 2.06
SNF8-208	ENST00000510195	SLC12A8	A0AV02	714 aa		27.9	■■■□□ 2.06
SNF8-208	ENST00000510195	LNP1	A1A4G5	178 aa		27.9	■■■□□ 2.06
SNF8-208	ENST00000510195	TULP2	O00295	520 aa		27.9	■■■□□ 2.06
SNF8-208	ENST00000510195	TRIP4	Q15650	581 aa	Predicted RBP	27.9	■■■□□ 2.06
SNF8-208	ENST00000510195	TMEM270	Q6UE05	265 aa		27.9	■■■□□ 2.06
SNF8-208	ENST00000510195	BHLHA9	Q7RTU4	235 aa		27.9	■■■□□ 2.06
SNF8-208	ENST00000510195	SYT12	Q8IV01	421 aa		27.9	■■■□□ 2.06
SNF8-208	ENST00000510195	DENND1C	Q8IV53	801 aa		27.9	■■■□□ 2.06
SNF8-208	ENST00000510195	FAM217A	Q8IXS0	508 aa		27.9	■■■□□ 2.06
SNF8-208	ENST00000510195	IPO4	Q8TEX9	1081 aa	Known RBP	27.9	■■■□□ 2.06
SNF8-208	ENST00000510195	NELFB	Q8WX92	580 aa		27.9	■■■□□ 2.06
SNF8-208	ENST00000510195	SLC2A11	Q9BYW1	496 aa		27.9	■■■□□ 2.06
SNF8-208	ENST00000510195	ABCC13	Q9NSE7	274 aa		27.9	■■■□□ 2.06
SNF8-208	ENST00000510195	PLK2	Q9NYY3	685 aa		27.9	■■■□□ 2.06
SNF8-208	ENST00000510195	HBS1L	Q9Y450	684 aa	Known RBP	27.9	■■■□□ 2.06
SNF8-208	ENST00000510195	AP5Z1	O43299	807 aa		27.89	■■■□□ 2.06
SNF8-208	ENST00000510195	HMBS	P08397	361 aa		27.89	■■■□□ 2.06
SNF8-208	ENST00000510195	BMP6	P22004	513 aa		27.89	■■■□□ 2.06
SNF8-208	ENST00000510195	HOXD12	P35452	270 aa		27.89	■■■□□ 2.06
SNF8-208	ENST00000510195	MARS	P56192	900 aa	Known RBP	27.89	■■■□□ 2.06
SNF8-208	ENST00000510195	ZNF445	P59923	1031 aa		27.89	■■■□□ 2.06
SNF8-208	ENST00000510195	ADIG	Q0VDE8	80 aa		27.89	■■■□□ 2.06
SNF8-208	ENST00000510195	CNGA2	Q16280	664 aa		27.89	■■■□□ 2.06
SNF8-208	ENST00000510195	KLHL10	Q6JEL2	608 aa		27.89	■■■□□ 2.06
SNF8-208	ENST00000510195	SIX6OS1	Q8N1H7	587 aa		27.89	■■■□□ 2.06
SNF8-208	ENST00000510195	LMO3	Q8TAP4	145 aa		27.89	■■■□□ 2.06
SNF8-208	ENST00000510195	RNF139	Q8WU17	664 aa		27.89	■■■□□ 2.06
SNF8-208	ENST00000510195	BHMT	Q93088	406 aa		27.89	■■■□□ 2.06
SNF8-208	ENST00000510195	ACOX2	Q99424	681 aa		27.89	■■■□□ 2.06
SNF8-208	ENST00000510195	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		27.88	■■■□□ 2.05
SNF8-208	ENST00000510195	WAS	P42768	502 aa		27.88	■■■□□ 2.05
SNF8-208	ENST00000510195	HARS2	P49590	506 aa	Known RBP	27.88	■■■□□ 2.05
SNF8-208	ENST00000510195	MFAP3	P55082	362 aa		27.88	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms