RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 WHAMMQ8TF30 809 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 HIST1H2AHQ96KK5 128 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 HIST1H2AJQ99878 128 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 EGFL8Q99944 293 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 H2AFJQ9BTM1 129 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 DOCK2Q92608 1830 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 COL11A2P13942 1736 aaPredicted RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 PER2O15055 1255 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 CILPO75339 1184 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 GPR32O75388 356 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 RPL17P18621 184 aaKnown RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 BMPR1AP36894 532 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 RABGGTBP53611 331 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 GHRHRQ02643 423 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 NPY5RQ15761 445 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 ZRANB3Q5FWF4 1079 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 TFDP3Q5H9I0 405 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 CEP85LQ5SZL2 805 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 THEMIS2Q5TEJ8 643 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 MARC1Q5VT66 337 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 IZUMO3Q5VZ72 239 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 RAP1GAP2Q684P5 730 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 FBXL19Q6PCT2 694 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 EMC1Q8N766 993 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 ZYG11BQ9C0D3 744 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 ADAMTS10Q9H324 1103 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 WRAP73Q9P2S5 460 aaPredicted RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 DEC1Q9P2X7 70 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 ALG6Q9Y672 507 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 C4BPAP04003 597 aaKnown RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 DNTTP04053 509 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 SERPINA4P29622 427 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 SPIRE1Q08AE8 756 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 UGP2Q16851 508 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 BRMS1LQ5PSV4 323 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 PPP1R26Q5T8A7 1209 aaPredicted RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 TMC5Q6UXY8 1006 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 TFAP2DQ7Z6R9 452 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 C1orf127Q8N9H9 656 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 GLIS3Q8NEA6 775 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 ADAM32Q8TC27 787 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 DIS3LQ8TF46 1054 aaKnown RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 OR8D1Q8WZ84 308 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 PKNOX2Q96KN3 472 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 CHP1Q99653 195 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 CENPKQ9BS16 269 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 AVENQ9NQS1 362 aaPredicted RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 GPATCH2LQ9NWQ4 482 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 AIPL1Q9NZN9 384 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 GMIPQ9P107 970 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 VANGL2Q9ULK5 521 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 TTC7AQ9ULT0 858 aaPredicted RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 PACSIN2Q9UNF0 486 aaPredicted RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 STXBP5LQ9Y2K9 1186 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 HNRNPA1P09651 372 aaKnown RBP eCLIP5.3□□□□□ -1.56
PHF3-210ENST00000509876 SLC5A3P53794 718 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 BCL2L1Q07817 233 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 MAPK8IP2Q13387 824 aaPredicted RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 PEX6Q13608 980 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 SLC10A6Q3KNW5 377 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 TTC19Q6DKK2 380 aaPredicted RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 ANKRD42Q8N9B4 389 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 KLHL23Q8NBE8 558 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 EXT2Q93063 718 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 FBXL18Q96ME1 805 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 ZSWIM1Q9BR11 485 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 SPATA16Q9BXB7 569 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 ZDHHC6Q9H6R6 413 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 CYLDQ9NQC7 956 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 FBXL5Q9UKA1 691 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 ATP8A1Q9Y2Q0 1164 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 PCDHA11Q9Y5I1 949 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 CCDC195A0A1B0GUA6 201 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 ZSCAN5CA6NGD5 496 aaPredicted RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 TMCC1O94876 653 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 ENDOD1O94919 500 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 CHRNA1P02708 482 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 PLEKP08567 350 aaPredicted RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 TROVE2P10155 538 aaKnown RBP eCLIP5.3□□□□□ -1.56
PHF3-210ENST00000509876 STIP1P31948 543 aaKnown RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 HSPA9P38646 679 aaKnown RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 DHX9Q08211 1270 aaKnown RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 NXNQ6DKJ4 435 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 PTRHD1Q6GMV3 140 aaKnown RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 UGT3A1Q6NUS8 523 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 LRRC55Q6ZSA7 311 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 CELF5Q8N6W0 485 aaKnown RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 ELMO3Q96BJ8 720 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 POLMQ9NP87 494 aaPredicted RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 NT5MQ9NPB1 228 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 SEPT3Q9UH03 358 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 SUN2Q9UH99 717 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 HBS1LQ9Y450 684 aaKnown RBP5.3□□□□□ -1.56
PHF3-210ENST00000509876 YIPF1Q9Y548 306 aa5.3□□□□□ -1.56
PHF3-210ENST00000509876 GOLGA8KD6RF30 607 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 MYH7P12883 1935 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 ITGALP20701 1170 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 CLCN1P35523 988 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 NR2C2P49116 596 aa5.29□□□□□ -1.56
PHF3-210ENST00000509876 PDIA2Q13087 525 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms