RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 ZNF510Q9Y2H8 683 aa18.8■□□□□ 0.6
TPM3-220ENST00000509601 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.8■□□□□ 0.6
TPM3-220ENST00000509601 SLC12A8A0AV02 714 aa18.79■□□□□ 0.6
TPM3-220ENST00000509601 YJEFN3A6XGL0 299 aa18.79■□□□□ 0.6
TPM3-220ENST00000509601 PRRT4C9JH25 899 aa18.79■□□□□ 0.6
TPM3-220ENST00000509601 E7ENQ6 273 aa18.79■□□□□ 0.6
TPM3-220ENST00000509601 SETSIPP0DME0 302 aa18.79■□□□□ 0.6
TPM3-220ENST00000509601 ADIGQ0VDE8 80 aa18.79■□□□□ 0.6
TPM3-220ENST00000509601 PLA2G2CQ5R387 149 aa18.79■□□□□ 0.6
TPM3-220ENST00000509601 C10orf76Q5T2E6 689 aa18.79■□□□□ 0.6
TPM3-220ENST00000509601 FYB2Q5VWT5 728 aa18.79■□□□□ 0.6
TPM3-220ENST00000509601 BSPRYQ5W0U4 402 aa18.79■□□□□ 0.6
TPM3-220ENST00000509601 DGLUCYQ7Z3D6 616 aa18.79■□□□□ 0.6
TPM3-220ENST00000509601 IRF2BP1Q8IU81 584 aa18.79■□□□□ 0.6
TPM3-220ENST00000509601 SCML4Q8N228 414 aa18.79■□□□□ 0.6
TPM3-220ENST00000509601 DCLK3Q9C098 648 aa18.79■□□□□ 0.6
TPM3-220ENST00000509601 PLK2Q9NYY3 685 aa18.79■□□□□ 0.6
TPM3-220ENST00000509601 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.79■□□□□ 0.6
TPM3-220ENST00000509601 CNTN6Q9UQ52 1028 aa18.79■□□□□ 0.6
TPM3-220ENST00000509601 GDF9O60383 454 aa18.78■□□□□ 0.6
TPM3-220ENST00000509601 PENKP01210 267 aaPredicted RBP18.78■□□□□ 0.6
TPM3-220ENST00000509601 ZNF806P0C7X5 589 aa18.78■□□□□ 0.6
TPM3-220ENST00000509601 LCP1P13796 627 aa18.78■□□□□ 0.6
TPM3-220ENST00000509601 BRD2P25440 801 aaKnown RBP18.78■□□□□ 0.6
TPM3-220ENST00000509601 CORO1AP31146 461 aaKnown RBP18.78■□□□□ 0.6
TPM3-220ENST00000509601 RGS7P49802 495 aa18.78■□□□□ 0.6
TPM3-220ENST00000509601 TRIP4Q15650 581 aaPredicted RBP18.78■□□□□ 0.6
TPM3-220ENST00000509601 CCDC6Q16204 474 aa18.78■□□□□ 0.6
TPM3-220ENST00000509601 USP39Q53GS9 565 aaKnown RBP18.78■□□□□ 0.6
TPM3-220ENST00000509601 DENND1CQ8IV53 801 aa18.78■□□□□ 0.6
TPM3-220ENST00000509601 ZNF513Q8N8E2 541 aaPredicted RBP18.78■□□□□ 0.6
TPM3-220ENST00000509601 RBBP8NLQ8NC74 664 aaPredicted RBP18.78■□□□□ 0.6
TPM3-220ENST00000509601 ACOX2Q99424 681 aa18.78■□□□□ 0.6
TPM3-220ENST00000509601 INTS2Q9H0H0 1204 aaKnown RBP18.78■□□□□ 0.6
TPM3-220ENST00000509601 CNGB3Q9NQW8 809 aa18.78■□□□□ 0.6
TPM3-220ENST00000509601 SFMBT1Q9UHJ3 866 aa18.78■□□□□ 0.6
TPM3-220ENST00000509601 SPTBN2O15020 2390 aa18.78■□□□□ 0.6
TPM3-220ENST00000509601 GON4LQ3T8J9 2241 aa18.78■□□□□ 0.6
TPM3-220ENST00000509601 ALDH1A2O94788 518 aa18.77■□□□□ 0.6
TPM3-220ENST00000509601 FGFR1OPO95684 399 aaKnown RBP18.77■□□□□ 0.6
TPM3-220ENST00000509601 SDHBP21912 280 aa18.77■□□□□ 0.6
TPM3-220ENST00000509601 CHKAP35790 457 aa18.77■□□□□ 0.6
TPM3-220ENST00000509601 DAOAP59103 153 aa18.77■□□□□ 0.6
TPM3-220ENST00000509601 EGFLAMQ63HQ2 1017 aa18.77■□□□□ 0.6
TPM3-220ENST00000509601 NUDT18Q6ZVK8 323 aa18.77■□□□□ 0.6
TPM3-220ENST00000509601 RSRC2Q7L4I2 434 aaKnown RBP18.77■□□□□ 0.6
TPM3-220ENST00000509601 FMNL3Q8IVF7 1028 aa18.77■□□□□ 0.6
TPM3-220ENST00000509601 EDEM1Q92611 657 aa18.77■□□□□ 0.6
TPM3-220ENST00000509601 BHMTQ93088 406 aa18.77■□□□□ 0.6
TPM3-220ENST00000509601 HSFY1Q96LI6 401 aa18.77■□□□□ 0.6
TPM3-220ENST00000509601 IPO9Q96P70 1041 aaKnown RBP18.77■□□□□ 0.6
TPM3-220ENST00000509601 POLMQ9NP87 494 aaPredicted RBP18.77■□□□□ 0.6
TPM3-220ENST00000509601 UBE2TQ9NPD8 197 aaPredicted RBP18.77■□□□□ 0.6
TPM3-220ENST00000509601 STRIP2Q9ULQ0 834 aa18.77■□□□□ 0.6
TPM3-220ENST00000509601 CLEC4EQ9ULY5 219 aa18.77■□□□□ 0.6
TPM3-220ENST00000509601 PCDHGA5Q9Y5G8 931 aa18.77■□□□□ 0.6
TPM3-220ENST00000509601 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.76■□□□□ 0.59
TPM3-220ENST00000509601 A0A1W2PQF6 199 aa18.76■□□□□ 0.59
TPM3-220ENST00000509601 PIK3R2O00459 728 aa18.76■□□□□ 0.59
TPM3-220ENST00000509601 RHOBTB1O94844 696 aa18.76■□□□□ 0.59
TPM3-220ENST00000509601 BCKDHBP21953 392 aa18.76■□□□□ 0.59
TPM3-220ENST00000509601 WASP42768 502 aa18.76■□□□□ 0.59
TPM3-220ENST00000509601 RPL34P49207 117 aaKnown RBP18.76■□□□□ 0.59
TPM3-220ENST00000509601 DGKGP49619 791 aa18.76■□□□□ 0.59
TPM3-220ENST00000509601 SF3A2Q15428 464 aaKnown RBP18.76■□□□□ 0.59
TPM3-220ENST00000509601 STILQ15468 1287 aa18.76■□□□□ 0.59
TPM3-220ENST00000509601 FAM217AQ8IXS0 508 aa18.76■□□□□ 0.59
TPM3-220ENST00000509601 SIX6OS1Q8N1H7 587 aa18.76■□□□□ 0.59
TPM3-220ENST00000509601 CPXM2Q8N436 756 aa18.76■□□□□ 0.59
TPM3-220ENST00000509601 FRMD1Q8N878 549 aa18.76■□□□□ 0.59
TPM3-220ENST00000509601 RLN3Q8WXF3 142 aa18.76■□□□□ 0.59
TPM3-220ENST00000509601 CD248Q9HCU0 757 aa18.76■□□□□ 0.59
TPM3-220ENST00000509601 RXFP3Q9NSD7 469 aa18.76■□□□□ 0.59
TPM3-220ENST00000509601 ABCC13Q9NSE7 274 aa18.76■□□□□ 0.59
TPM3-220ENST00000509601 OLA1Q9NTK5 396 aaKnown RBP18.76■□□□□ 0.59
TPM3-220ENST00000509601 SLC27A6Q9Y2P4 619 aa18.76■□□□□ 0.59
TPM3-220ENST00000509601 DCDC2BA2VCK2 349 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 M0QYV0 167 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 GFRA2O00451 464 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 SLC9A1P19634 815 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 NTSR1P30989 418 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 P2RY2P41231 377 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 GPD2P43304 727 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 MAP7D1Q3KQU3 841 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 PMS2CLQ68D20 193 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 GJB7Q6PEY0 223 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 TRMT11Q7Z4G4 463 aaKnown RBP18.75■□□□□ 0.59
TPM3-220ENST00000509601 MLKLQ8NB16 471 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 NETO1Q8TDF5 533 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 CLEC4CQ8WTT0 213 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 IRGQQ8WZA9 623 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 PLD4Q96BZ4 506 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 RTKNQ9BST9 563 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 CRACR2AQ9BSW2 395 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 CLSTN2Q9H4D0 955 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 SMOC1Q9H4F8 434 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 STOML2Q9UJZ1 356 aa18.75■□□□□ 0.59
TPM3-220ENST00000509601 CDV3Q9UKY7 258 aaKnown RBP18.75■□□□□ 0.59
TPM3-220ENST00000509601 HBS1LQ9Y450 684 aaKnown RBP18.75■□□□□ 0.59
TPM3-220ENST00000509601 LAMA1P25391 3075 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms