RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 PSMA7O14818 248 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 MDM4O15151 490 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 TRIM24O15164 1050 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 AP5Z1O43299 807 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 KCNK5O95279 499 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 ZBED1O96006 694 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 KLKB1P03952 638 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 CYBBP04839 570 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 VDRP11473 427 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 TBXAS1P24557 533 aaPredicted RBP13.25□□□□□ -0.29
KDM3B-206ENST00000509468 ZNF132P52740 706 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 YWHAGP61981 247 aaKnown RBP eCLIP13.25□□□□□ -0.29
KDM3B-206ENST00000509468 IRX4P78413 519 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 CETN1Q12798 172 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 CBWD6Q4V339 395 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 CBWD3Q5JTY5 395 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 CBWD5Q5RIA9 395 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 TMEFF1Q8IYR6 380 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 IPO4Q8TEX9 1081 aaKnown RBP13.25□□□□□ -0.29
KDM3B-206ENST00000509468 ARID3AQ99856 593 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 GABRG3Q99928 467 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 NUSAP1Q9BXS6 441 aaKnown RBP13.25□□□□□ -0.29
KDM3B-206ENST00000509468 TMEM9BQ9NQ34 198 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 OLA1Q9NTK5 396 aaKnown RBP13.25□□□□□ -0.29
KDM3B-206ENST00000509468 EVLQ9UI08 416 aaPredicted RBP13.25□□□□□ -0.29
KDM3B-206ENST00000509468 MBD1Q9UIS9 605 aaPredicted RBP13.25□□□□□ -0.29
KDM3B-206ENST00000509468 RASAL2Q9UJF2 1139 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 HCN2Q9UL51 889 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 SLC27A6Q9Y2P4 619 aa13.25□□□□□ -0.29
KDM3B-206ENST00000509468 A0A1W2PQF6 199 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 PRRT4C9JH25 899 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 XPO1O14980 1071 aaKnown RBP13.24□□□□□ -0.29
KDM3B-206ENST00000509468 PMM2O15305 246 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 TIMM44O43615 452 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 HMBSP08397 361 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 CD19P15391 556 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 GABRG2P18507 467 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 CORO1AP31146 461 aaKnown RBP13.24□□□□□ -0.29
KDM3B-206ENST00000509468 HOXD12P35452 270 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 WASP42768 502 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 HARS2P49590 506 aaKnown RBP13.24□□□□□ -0.29
KDM3B-206ENST00000509468 BCAT1P54687 386 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 N4BP2L1Q5TBK1 243 aaPredicted RBP13.24□□□□□ -0.29
KDM3B-206ENST00000509468 LYSMD4Q5XG99 296 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 EGFLAMQ63HQ2 1017 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 TOGARAM2Q6ZUX3 1019 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 CPXM2Q8N436 756 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 FRMD1Q8N878 549 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 CEP76Q8TAP6 659 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 UCMAQ8WVF2 138 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 SLC35C1Q96A29 364 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 CEP63Q96MT8 703 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 IPO9Q96P70 1041 aaKnown RBP13.24□□□□□ -0.29
KDM3B-206ENST00000509468 SLC2A11Q9BYW1 496 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 PILRBQ9UKJ0 227 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 TSPAN16Q9UKR8 245 aa13.24□□□□□ -0.29
KDM3B-206ENST00000509468 AGO1Q9UL18 857 aaKnown RBP13.24□□□□□ -0.29
KDM3B-206ENST00000509468 TNRC6BQ9UPQ9 1833 aaKnown RBP13.24□□□□□ -0.29
KDM3B-206ENST00000509468 SLC12A8A0AV02 714 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 PENKP01210 267 aaPredicted RBP13.23□□□□□ -0.29
KDM3B-206ENST00000509468 PTGER3P43115 390 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 FMO5P49326 533 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 PMS1P54277 932 aaKnown RBP13.23□□□□□ -0.29
KDM3B-206ENST00000509468 RPL6Q02878 288 aaKnown RBP13.23□□□□□ -0.29
KDM3B-206ENST00000509468 PDE4CQ08493 712 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 BST2Q10589 180 aaKnown RBP13.23□□□□□ -0.29
KDM3B-206ENST00000509468 GOLGA7BQ2TAP0 167 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 TRIM61Q5EBN2 209 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 FYB2Q5VWT5 728 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 SLC23A3Q6PIS1 610 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 RABEPKQ7Z6M1 372 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 DENND1CQ8IV53 801 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 DDI1Q8WTU0 396 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 RNF139Q8WU17 664 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 KCTD13Q8WZ19 329 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 BHMTQ93088 406 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 PLD4Q96BZ4 506 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 ACOX2Q99424 681 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 ABCC13Q9NSE7 274 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 PLK2Q9NYY3 685 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 CALCOCO1Q9P1Z2 691 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 ANGPTL2Q9UKU9 493 aa13.23□□□□□ -0.29
KDM3B-206ENST00000509468 HBS1LQ9Y450 684 aaKnown RBP13.23□□□□□ -0.29
KDM3B-206ENST00000509468 BICDL2A1A5D9 508 aa13.22□□□□□ -0.29
KDM3B-206ENST00000509468 TRIM49BA6NDI0 452 aa13.22□□□□□ -0.29
KDM3B-206ENST00000509468 PATE3B3GLJ2 98 aa13.22□□□□□ -0.29
KDM3B-206ENST00000509468 CDX4O14627 284 aaPredicted RBP13.22□□□□□ -0.29
KDM3B-206ENST00000509468 P4HA2O15460 535 aa13.22□□□□□ -0.29
KDM3B-206ENST00000509468 PAEPP09466 180 aa13.22□□□□□ -0.29
KDM3B-206ENST00000509468 SETSIPP0DME0 302 aa13.22□□□□□ -0.29
KDM3B-206ENST00000509468 MFAP3P55082 362 aa13.22□□□□□ -0.29
KDM3B-206ENST00000509468 ZNF445P59923 1031 aa13.22□□□□□ -0.29
KDM3B-206ENST00000509468 LRMPQ12912 555 aa13.22□□□□□ -0.29
KDM3B-206ENST00000509468 STARD3Q14849 445 aa13.22□□□□□ -0.29
KDM3B-206ENST00000509468 STILQ15468 1287 aa13.22□□□□□ -0.29
KDM3B-206ENST00000509468 TRIP4Q15650 581 aaPredicted RBP13.22□□□□□ -0.29
KDM3B-206ENST00000509468 DUOXA1Q1HG43 343 aa13.22□□□□□ -0.29
KDM3B-206ENST00000509468 CCDC40Q4G0X9 1142 aa13.22□□□□□ -0.29
KDM3B-206ENST00000509468 BSPRYQ5W0U4 402 aa13.22□□□□□ -0.29
KDM3B-206ENST00000509468 ISM2Q6H9L7 571 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms