RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 MAML2Q8IZL2 1156 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 CLYBLQ8N0X4 340 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 ANKS1AQ92625 1134 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 RRNAD1Q96FB5 475 aaKnown RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 CRACR2AQ9BSW2 395 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 TRMT112Q9UI30 125 aaKnown RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 SHOC2Q9UQ13 582 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 C15orf38-AP3S2A0A0A6YYH1 394 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 WDR91A4D1P6 747 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 STRNO43815 780 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 PHF2O75151 1096 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 GOSR1O95249 250 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 GDF11O95390 407 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 BMP2P12643 396 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 LSSP48449 732 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 POLE2P56282 527 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF280AP59817 542 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 SLC13A2Q13183 592 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 AASDHQ4L235 1098 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 KLHL26Q53HC5 615 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 PPP1R26Q5T8A7 1209 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 TADA2BQ86TJ2 420 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 ZBTB44Q8NCP5 570 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 SLC9A6Q92581 669 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 ART5Q96L15 291 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 GAL3ST4Q96RP7 486 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 NUF2Q9BZD4 464 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 ZC4H2Q9NQZ6 224 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 CCM2LQ9NUG4 571 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 TBCCD1Q9NVR7 557 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 DBNLQ9UJU6 430 aaKnown RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 PCDHB4Q9Y5E5 795 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 TRPV2Q9Y5S1 764 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 SNX14Q9Y5W7 946 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 LYVE1Q9Y5Y7 322 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 MAD1L1Q9Y6D9 718 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 A0A075B6Q4 140 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 FAM237BA0A1B0GVD1 139 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 CHURC1-FNTBB4DL54 471 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 TSPAN3O60637 253 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 CYTIPO60759 359 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 SRGAP2O75044 1071 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 DLATP10515 647 aaKnown RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 LUMP51884 338 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 CDH8P55286 799 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 NLRP12P59046 1061 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 NLRP5P59047 1200 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 RNF4P78317 190 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 MXD4Q14582 209 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 NECTIN1Q15223 517 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 ALX1Q15699 326 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 PRSS53Q2L4Q9 553 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 KRBOX4Q5JUW0 171 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 MRM1Q6IN84 353 aaKnown RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 TTI2Q6NXR4 508 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 UNC13DQ70J99 1090 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 CLRN3Q8NCR9 226 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 SLC30A5Q8TAD4 765 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 GLG1Q92896 1179 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 TMEM41AQ96HV5 264 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 SUSD3Q96L08 255 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 WHRNQ9P202 907 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 VPS18Q9P253 973 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 PCDHGA3Q9Y5H0 932 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 SLC16A5O15375 505 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 KRT86O43790 486 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 S100A6P06703 90 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 RAP2AP10114 183 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 MSR1P21757 451 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 TSPAN7P41732 249 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 CLCN2P51788 898 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 ITGADQ13349 1161 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 UBE3CQ15386 1083 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 HLFQ16534 295 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 NTRK2Q16620 822 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 KLHDC10Q6PID8 442 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 USP45Q70EL2 814 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 DHX32Q7L7V1 743 aaKnown RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 BTLAQ7Z6A9 289 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 PDZD8Q8NEN9 1154 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 EXD1Q8NHP7 514 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 FRS2Q8WU20 508 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 WDR60Q8WVS4 1066 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 AUTS2Q8WXX7 1259 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 JADE3Q92613 823 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 RFT1Q96AA3 541 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 AIFM3Q96NN9 605 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 GPN1Q9HCN4 374 aaPredicted RBP4.06□□□□□ -1.76
NEDD4-209ENST00000508871 POLE3Q9NRF9 147 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 UCKL1Q9NWZ5 548 aa4.06□□□□□ -1.76
NEDD4-209ENST00000508871 A0A1W2PQ09 198 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 RASGRF2O14827 1237 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 TTI1O43156 1089 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 PRICKLE3O43900 615 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 RHOBTB1O94844 696 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 SRGNP10124 158 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 RALBP11234 206 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 LAG3P18627 525 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms