RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 CISD3P0C7P0 127 aa13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 HOXB2P14652 356 aa13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 WASP42768 502 aa13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 PTGER3P43115 390 aa13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 DHPSP49366 369 aaPredicted RBP13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 DGKGP49619 791 aa13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 NUCB2P80303 420 aa13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 EFEMP1Q12805 493 aa13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 BECN1Q14457 450 aa13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 GOLGA7BQ2TAP0 167 aa13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 ARMCX6Q7L4S7 300 aa13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 LSM14BQ9BX40 385 aaKnown RBP13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 PLK2Q9NYY3 685 aa13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 CALCOCO1Q9P1Z2 691 aa13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 ARMCX3Q9UH62 379 aaPredicted RBP13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 CIZ1Q9ULV3 898 aaPredicted RBP13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 ASCC3Q8N3C0 2202 aaKnown RBP13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 FRYQ5TBA9 3013 aa13.65□□□□□ -0.22
HMGCS1-205ENST00000508319 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 XPO1O14980 1071 aaKnown RBP13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 ZBED1O96006 694 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 CD44P16070 742 aaKnown RBP13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 CORO1AP31146 461 aaKnown RBP13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 TKTL1P51854 596 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 BCAT1P54687 386 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 SLC8A3P57103 927 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 YWHAGP61981 247 aaKnown RBP eCLIP13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 COG7P83436 770 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 PDE4CQ08493 712 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 SGO2Q562F6 1265 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 SPDYCQ5MJ68 293 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 FYB2Q5VWT5 728 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 KIAA1211LQ6NV74 962 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 LPCAT2Q7L5N7 544 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 TMEFF1Q8IYR6 380 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 CHPFQ8IZ52 775 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 PGBD3Q8N328 593 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 ARHGAP18Q8N392 663 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 PIGKQ92643 395 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 GTPBP4Q9BZE4 634 aaKnown RBP13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 ULBP1Q9BZM6 244 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 MARCH2Q9P0N8 246 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 FBXO10Q9UK96 956 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 ZNF510Q9Y2H8 683 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 ASPMQ8IZT6 3477 aa13.64□□□□□ -0.23
HMGCS1-205ENST00000508319 CKAP5Q14008 2032 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 C4orf47A7E2U8 309 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 O00370 1275 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 CDX4O14627 284 aaPredicted RBP13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 PSMA7O14818 248 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 KHNYNO15037 678 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 HMBSP08397 361 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 NDUFV2P19404 249 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 CHKAP35790 457 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 FMO5P49326 533 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 MFAP3P55082 362 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 YWHAEP62258 255 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 IRX4P78413 519 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 ADIGQ0VDE8 80 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 BST2Q10589 180 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 LRMPQ12912 555 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 BYSLQ13895 437 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 PEAR1Q5VY43 1037 aaPredicted RBP13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 PM20D1Q6GTS8 502 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 RSRC2Q7L4I2 434 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 FAM217AQ8IXS0 508 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 ELOA2Q8IYF1 753 aaPredicted RBP13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 IPO4Q8TEX9 1081 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 NDRG1Q92597 394 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 ERLEC1Q96DZ1 483 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 DHTKD1Q96HY7 919 aaPredicted RBP13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 TMEM74BQ9NUR3 256 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 CACNA2D2Q9NY47 1150 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 EVLQ9UI08 416 aaPredicted RBP13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 HOOK1Q9UJC3 728 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 MAN1B1Q9UKM7 699 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 AGO1Q9UL18 857 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 SLC27A6Q9Y2P4 619 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 RAD54BQ9Y620 910 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 PCDH15Q96QU1 1955 aa13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 ATXN2Q99700 1313 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-205ENST00000508319 CACNA1EQ15878 2313 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 IGHV1OR15-9A0A0B4J2B8 117 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 GFRA2O00451 464 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 PMM2O15305 246 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 MAP3K13O43283 966 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 KCNK5O95279 499 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 PRKCSHP14314 528 aaPredicted RBP13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 CD19P15391 556 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 BMP6P22004 513 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 TBXAS1P24557 533 aaPredicted RBP13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 PMLP29590 882 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 STIM1Q13586 685 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 GEN1Q17RS7 908 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 PKDCCQ504Y2 493 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 TRIM61Q5EBN2 209 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 N4BP2L1Q5TBK1 243 aaPredicted RBP13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 LYSMD4Q5XG99 296 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 ISM2Q6H9L7 571 aa13.62□□□□□ -0.23
HMGCS1-205ENST00000508319 TTI2Q6NXR4 508 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms