RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 DEFB119Q8N690 84 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 ZNF513Q8N8E2 541 aaPredicted RBP6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 KCNV2Q8TDN2 545 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 PIGKQ92643 395 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 JAKMIP2Q96AA8 810 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 ERLEC1Q96DZ1 483 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 EEF2KMTQ96G04 330 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 SPATA32Q96LK8 384 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 ARID3AQ99856 593 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 NT5C1AQ9BXI3 368 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 NIF3L1Q9GZT8 377 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 FBXO44Q9H4M3 255 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 CYP3A43Q9HB55 503 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 TMEM9BQ9NQ34 198 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 FSCN3Q9NQT6 498 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 TLR8Q9NR97 1041 aaKnown RBP6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 PLK2Q9NYY3 685 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 CALCOCO1Q9P1Z2 691 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 DEC1Q9P2X7 70 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 USP25Q9UHP3 1055 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 EVLQ9UI08 416 aaPredicted RBP6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 FBXO10Q9UK96 956 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 PILRBQ9UKJ0 227 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 FRMD4BQ9Y2L6 1034 aa6.78□□□□□ -1.32
HMGN1P16-201ENST00000508308 CACNA1GO43497 2377 aa6.77□□□□□ -1.32
HMGN1P16-201ENST00000508308 ATXN2Q99700 1313 aaKnown RBP6.77□□□□□ -1.32
HMGN1P16-201ENST00000508308 IGHV1OR15-9A0A0B4J2B8 117 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 TULP2O00295 520 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 CALUO43852 315 aaPredicted RBP6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 STC2O76061 302 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 ALDH1A2O94788 518 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 PENKP01210 267 aaPredicted RBP6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 RARGP13631 454 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 P4HA1P13674 534 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 HOXB2P14652 356 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 NDUFV2P19404 249 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 SPINK2P20155 84 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 CSRP1P21291 193 aaKnown RBP6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 SYKP43405 635 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 NOVA1P51513 510 aaKnown RBP6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 RAD23BP54727 409 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 ENPEPQ07075 957 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 ZNF394Q53GI3 561 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 TRIM61Q5EBN2 209 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 RAB41Q5JT25 222 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 SPDYCQ5MJ68 293 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 C10orf120Q5SQS8 335 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 FYB2Q5VWT5 728 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 BTBD8Q5XKL5 378 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 GRAMD4Q6IC98 578 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 SLC23A3Q6PIS1 610 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 TPGS1Q6ZTW0 290 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 INTS8Q75QN2 995 aaKnown RBP6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 LPCAT2Q7L5N7 544 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 PIP4P1Q86T03 277 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 SYT12Q8IV01 421 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 SLC41A1Q8IVJ1 513 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 FAM186BQ8IYM0 893 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 SLC4A11Q8NBS3 891 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 RBBP8NLQ8NC74 664 aaPredicted RBP6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 OR2I1PQ8NGU4 316 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 TATDN2Q93075 761 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 GABRG3Q99928 467 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 BBS2Q9BXC9 721 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 DUSP16Q9BY84 665 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 CAPN10Q9HC96 672 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 TMEM8AQ9HCN3 771 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 PNPLA8Q9NP80 782 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 POLMQ9NP87 494 aaPredicted RBP6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 DNAJC17Q9NVM6 304 aaKnown RBP6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 CACNA2D2Q9NY47 1150 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 BCCIPQ9P287 314 aaKnown RBP eCLIP6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 WDR35Q9P2L0 1181 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 CLEC4EQ9ULY5 219 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 PCDHA5Q9Y5H7 936 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 RAD54BQ9Y620 910 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 CKAP5Q14008 2032 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 NUMA1Q14980 2115 aa6.77□□□□□ -1.33
HMGN1P16-201ENST00000508308 CABIN1Q9Y6J0 2220 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 LOC400499M0QZD8 3231 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 A0A1W2PQ27 194 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 A0A1W2PQ64 194 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 A0A1W2PQD8 194 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 C1QTNF9BB2RNN3 333 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 GFRA2O00451 464 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 CLSTN1O94985 981 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 ZNF202O95125 648 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 HSP90AA1P07900 732 aaKnown RBP6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 C1QTNF9P0C862 333 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 CEACAM1P13688 526 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 ENGP17813 658 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 GTF2H1P32780 548 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 PSMC2P35998 433 aaKnown RBP6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 PLA2G4AP47712 749 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 PMS1P54277 932 aaKnown RBP6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 MFAP3P55082 362 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 FAM193AP78312 1265 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 KRT85P78386 507 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 ZNF252P-AS1Q0IIN9 211 aa6.76□□□□□ -1.33
HMGN1P16-201ENST00000508308 SEMA3BQ13214 749 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms