RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 DENND1BQ6P3S1 775 aa20.77■□□□□ 0.92
SFXN1-209ENST00000508290 C11orf57Q6ZUT1 292 aaPredicted RBP20.77■□□□□ 0.92
SFXN1-209ENST00000508290 ASCL5Q7RTU5 278 aa20.77■□□□□ 0.92
SFXN1-209ENST00000508290 WDR5BQ86VZ2 330 aa20.77■□□□□ 0.92
SFXN1-209ENST00000508290 FMNL3Q8IVF7 1028 aa20.77■□□□□ 0.92
SFXN1-209ENST00000508290 UNC45BQ8IWX7 931 aa20.77■□□□□ 0.92
SFXN1-209ENST00000508290 FAM217AQ8IXS0 508 aa20.77■□□□□ 0.92
SFXN1-209ENST00000508290 TERB1Q8NA31 727 aa20.77■□□□□ 0.92
SFXN1-209ENST00000508290 EDEM1Q92611 657 aa20.77■□□□□ 0.92
SFXN1-209ENST00000508290 EZH1Q92800 747 aaPredicted RBP20.77■□□□□ 0.92
SFXN1-209ENST00000508290 WBP2Q969T9 261 aa20.77■□□□□ 0.92
SFXN1-209ENST00000508290 STK33Q9BYT3 514 aa20.77■□□□□ 0.92
SFXN1-209ENST00000508290 TAB2Q9NYJ8 693 aa20.77■□□□□ 0.92
SFXN1-209ENST00000508290 LIMA1Q9UHB6 759 aaKnown RBP20.77■□□□□ 0.92
SFXN1-209ENST00000508290 STOML2Q9UJZ1 356 aa20.77■□□□□ 0.92
SFXN1-209ENST00000508290 NEDD8-MDP1E9PL57 170 aa20.76■□□□□ 0.91
SFXN1-209ENST00000508290 FOXN3O00409 490 aaPredicted RBP20.76■□□□□ 0.91
SFXN1-209ENST00000508290 GABBR2O75899 941 aa20.76■□□□□ 0.91
SFXN1-209ENST00000508290 KLKB1P03952 638 aa20.76■□□□□ 0.91
SFXN1-209ENST00000508290 GLI1P08151 1106 aa20.76■□□□□ 0.91
SFXN1-209ENST00000508290 KCNMA1Q12791 1236 aa20.76■□□□□ 0.91
SFXN1-209ENST00000508290 PDCLQ13371 301 aa20.76■□□□□ 0.91
SFXN1-209ENST00000508290 RAPGEF1Q13905 1077 aa20.76■□□□□ 0.91
SFXN1-209ENST00000508290 NDRG1Q92597 394 aaKnown RBP20.76■□□□□ 0.91
SFXN1-209ENST00000508290 SERPINB11Q96P15 392 aa20.76■□□□□ 0.91
SFXN1-209ENST00000508290 NAA15Q9BXJ9 866 aaKnown RBP20.76■□□□□ 0.91
SFXN1-209ENST00000508290 MIS12Q9H081 205 aa20.76■□□□□ 0.91
SFXN1-209ENST00000508290 VPS16Q9H269 839 aa20.76■□□□□ 0.91
SFXN1-209ENST00000508290 TMEM63CQ9P1W3 806 aa20.76■□□□□ 0.91
SFXN1-209ENST00000508290 AGO1Q9UL18 857 aaKnown RBP20.76■□□□□ 0.91
SFXN1-209ENST00000508290 RAB23Q9ULC3 237 aa20.76■□□□□ 0.91
SFXN1-209ENST00000508290 ZFHX2Q9C0A1 2572 aaPredicted RBP20.76■□□□□ 0.91
SFXN1-209ENST00000508290 TBC1D3BA6NDS4 549 aa20.75■□□□□ 0.91
SFXN1-209ENST00000508290 LRRC10BA6NIK2 292 aa20.75■□□□□ 0.91
SFXN1-209ENST00000508290 PENKP01210 267 aaPredicted RBP20.75■□□□□ 0.91
SFXN1-209ENST00000508290 SLC6A11P48066 632 aa20.75■□□□□ 0.91
SFXN1-209ENST00000508290 APBA1Q02410 837 aa20.75■□□□□ 0.91
SFXN1-209ENST00000508290 DMC1Q14565 340 aa20.75■□□□□ 0.91
SFXN1-209ENST00000508290 DRAP1Q14919 205 aaPredicted RBP20.75■□□□□ 0.91
SFXN1-209ENST00000508290 DPY19L2P1Q6NXN4 242 aa20.75■□□□□ 0.91
SFXN1-209ENST00000508290 C12orf40Q86WS4 652 aa20.75■□□□□ 0.91
SFXN1-209ENST00000508290 DENND1CQ8IV53 801 aa20.75■□□□□ 0.91
SFXN1-209ENST00000508290 SCUBE3Q8IX30 993 aa20.75■□□□□ 0.91
SFXN1-209ENST00000508290 PHTF2Q8N3S3 785 aa20.75■□□□□ 0.91
SFXN1-209ENST00000508290 RUBCNQ92622 972 aa20.75■□□□□ 0.91
SFXN1-209ENST00000508290 AZIN2Q96A70 460 aa20.75■□□□□ 0.91
SFXN1-209ENST00000508290 LSM14BQ9BX40 385 aaKnown RBP20.75■□□□□ 0.91
SFXN1-209ENST00000508290 SLC2A11Q9BYW1 496 aa20.75■□□□□ 0.91
SFXN1-209ENST00000508290 POPDC2Q9HBU9 364 aa20.75■□□□□ 0.91
SFXN1-209ENST00000508290 DNAJC17Q9NVM6 304 aaKnown RBP20.75■□□□□ 0.91
SFXN1-209ENST00000508290 ASNSD1Q9NWL6 643 aa20.75■□□□□ 0.91
SFXN1-209ENST00000508290 MMP17Q9ULZ9 603 aa20.75■□□□□ 0.91
SFXN1-209ENST00000508290 STARD13Q9Y3M8 1113 aa20.75■□□□□ 0.91
SFXN1-209ENST00000508290 SMTNL1A8MU46 457 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 CAPN9O14815 690 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 APBB3O95704 486 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 CALCAP01258 141 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 HMBSP08397 361 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 NCAM1P13591 858 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 CDK11BP21127 795 aaKnown RBP20.74■□□□□ 0.91
SFXN1-209ENST00000508290 CLCN1P35523 988 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 DGKEP52429 567 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 MTA1Q13330 715 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 KLHL40Q2TBA0 621 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 EOGTQ5NDL2 527 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 PKN3Q6P5Z2 889 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 TPGS1Q6ZTW0 290 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 ZDHHC17Q8IUH5 632 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 ZNF557Q8N988 423 aaPredicted RBP20.74■□□□□ 0.91
SFXN1-209ENST00000508290 SUMF1Q8NBK3 374 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 IPO4Q8TEX9 1081 aaKnown RBP20.74■□□□□ 0.91
SFXN1-209ENST00000508290 FAM149B1Q96BN6 582 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 PPP1R13BQ96KQ4 1090 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 DDX50Q9BQ39 737 aaKnown RBP20.74■□□□□ 0.91
SFXN1-209ENST00000508290 TMEM51Q9NW97 253 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 EBF1Q9UH73 591 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 FHOD1Q9Y613 1164 aa20.74■□□□□ 0.91
SFXN1-209ENST00000508290 FANCMQ8IYD8 2048 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 LGALS16A8MUM7 142 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 E5RJQ4 531 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 F8VZ95 297 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 NPC1O15118 1278 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 IRAK2O43187 625 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 LSM8O95777 96 aaKnown RBP20.73■□□□□ 0.91
SFXN1-209ENST00000508290 IGLV3-27P01718 113 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 ZNF18P17022 549 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 KIR2DL1P43626 348 aaPredicted RBP20.73■□□□□ 0.91
SFXN1-209ENST00000508290 SLC11A2P49281 568 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 FNTBP49356 437 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 DGKGP49619 791 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 COPB1P53618 953 aaKnown RBP20.73■□□□□ 0.91
SFXN1-209ENST00000508290 YWHAZP63104 245 aaKnown RBP20.73■□□□□ 0.91
SFXN1-209ENST00000508290 KDSRQ06136 332 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 MPPE1Q53F39 396 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 C2orf27AQ580R0 203 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 EFHC1Q5JVL4 640 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 ADGRF1Q5T601 910 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 CAVIN1Q6NZI2 390 aaKnown RBP20.73■□□□□ 0.91
SFXN1-209ENST00000508290 TOGARAM2Q6ZUX3 1019 aa20.73■□□□□ 0.91
SFXN1-209ENST00000508290 SLC47A2Q86VL8 602 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms