RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 MAN2B1O00754 1011 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 IRF1P10914 325 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 CD72P21854 359 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 TARSP26639 723 aaKnown RBP17.1■□□□□ 0.33
DDR1-261ENST00000507901 GJA4P35212 333 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 GSCP56915 257 aaPredicted RBP17.1■□□□□ 0.33
DDR1-261ENST00000507901 YWHAZP63104 245 aaKnown RBP17.1■□□□□ 0.33
DDR1-261ENST00000507901 SLC6A3Q01959 620 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 NNTQ13423 1086 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 DHCR24Q15392 516 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 CLEC16AQ2KHT3 1053 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 HGSNATQ68CP4 663 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 C1orf228Q6PIY5 440 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 ZNF852Q6ZMS4 543 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 RSRC2Q7L4I2 434 aaKnown RBP17.1■□□□□ 0.33
DDR1-261ENST00000507901 CPA6Q8N4T0 437 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 TTC8Q8TAM2 541 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 IPO4Q8TEX9 1081 aaKnown RBP17.1■□□□□ 0.33
DDR1-261ENST00000507901 CPA5Q8WXQ8 436 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 SYN2Q92777 582 aaPredicted RBP17.1■□□□□ 0.33
DDR1-261ENST00000507901 CLDN23Q96B33 292 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 PLD4Q96BZ4 506 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 IQCDQ96DY2 449 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 SLC39A13Q96H72 371 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 POPDC2Q9HBU9 364 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 STOML2Q9UJZ1 356 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 SH3BP1Q9Y3L3 701 aa17.1■□□□□ 0.33
DDR1-261ENST00000507901 SLC12A8A0AV02 714 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 MSI1O43347 362 aaKnown RBP17.09■□□□□ 0.33
DDR1-261ENST00000507901 GALR2O43603 387 aaPredicted RBP17.09■□□□□ 0.33
DDR1-261ENST00000507901 HSF2BPO75031 334 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 DAB1O75553 588 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 NFATC1O95644 943 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 NCAM1P13591 858 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 PITX1P78337 314 aaPredicted RBP17.09■□□□□ 0.33
DDR1-261ENST00000507901 ARID5AQ03989 594 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 GOLGA8FQ08AF8 430 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 GOLGA8DPQ0D2H9 430 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 TCF15Q12870 199 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 ARID5BQ14865 1188 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 EFHC1Q5JVL4 640 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 OTUD1Q5VV17 481 aaPredicted RBP17.09■□□□□ 0.33
DDR1-261ENST00000507901 NAIF1Q69YI7 327 aaPredicted RBP17.09■□□□□ 0.33
DDR1-261ENST00000507901 ERICH1Q86X53 443 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 PHF13Q86YI8 300 aaPredicted RBP17.09■□□□□ 0.33
DDR1-261ENST00000507901 VSTM4Q8IW00 320 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 RNF139Q8WU17 664 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 FAM3CQ92520 227 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 NT5C3BQ969T7 300 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 C18orf8Q96DM3 657 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 TRIM62Q9BVG3 475 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 ADAM33Q9BZ11 813 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 MARK1Q9P0L2 795 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 STRIP2Q9ULQ0 834 aa17.09■□□□□ 0.33
DDR1-261ENST00000507901 TCRBV5S1A1TA0A578 114 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 TRDMT1O14717 391 aaKnown RBP17.08■□□□□ 0.32
DDR1-261ENST00000507901 HOXC11O43248 304 aaPredicted RBP17.08■□□□□ 0.32
DDR1-261ENST00000507901 CBFA2T2O43439 604 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 CCDC172P0C7W6 258 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 OPRD1P41143 372 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 KPNA1P52294 538 aaPredicted RBP17.08■□□□□ 0.32
DDR1-261ENST00000507901 SNX16P57768 344 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 ZBED6P86452 979 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 RING1Q06587 406 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 ASIC2Q16515 512 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 C2CD6Q53TS8 623 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 SFMBT2Q5VUG0 894 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 OR6B2Q6IFH4 312 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 TRNP1Q6NT89 227 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 MON1BQ7L1V2 547 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 ARCQ7LC44 396 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 ZNF571Q7Z3V5 609 aaPredicted RBP17.08■□□□□ 0.32
DDR1-261ENST00000507901 BNIPLQ7Z465 357 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 TAC4Q86UU9 113 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 TTC16Q8NEE8 873 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 FAM149B1Q96BN6 582 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 FCRL2Q96LA5 508 aaPredicted RBP17.08■□□□□ 0.32
DDR1-261ENST00000507901 NELL2Q99435 816 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 PDCL3Q9H2J4 239 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 HAUS4Q9H6D7 363 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 TMEM59LQ9UK28 342 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 AGO1Q9UL18 857 aaKnown RBP17.08■□□□□ 0.32
DDR1-261ENST00000507901 ZNF510Q9Y2H8 683 aa17.08■□□□□ 0.32
DDR1-261ENST00000507901 STK25O00506 426 aa17.07■□□□□ 0.32
DDR1-261ENST00000507901 IRAK2O43187 625 aa17.07■□□□□ 0.32
DDR1-261ENST00000507901 LATS1O95835 1130 aa17.07■□□□□ 0.32
DDR1-261ENST00000507901 CHRM1P11229 460 aaPredicted RBP17.07■□□□□ 0.32
DDR1-261ENST00000507901 CHRNB1P11230 501 aa17.07■□□□□ 0.32
DDR1-261ENST00000507901 CORO1AP31146 461 aaKnown RBP17.07■□□□□ 0.32
DDR1-261ENST00000507901 HNRNPH3P31942 346 aaKnown RBP17.07■□□□□ 0.32
DDR1-261ENST00000507901 RPS9P46781 194 aaKnown RBP17.07■□□□□ 0.32
DDR1-261ENST00000507901 CCINQ13939 588 aa17.07■□□□□ 0.32
DDR1-261ENST00000507901 TMEM196Q5HYL7 178 aa17.07■□□□□ 0.32
DDR1-261ENST00000507901 LY6G5CQ5SRR4 150 aa17.07■□□□□ 0.32
DDR1-261ENST00000507901 MMS22LQ6ZRQ5 1243 aa17.07■□□□□ 0.32
DDR1-261ENST00000507901 TOGARAM2Q6ZUX3 1019 aa17.07■□□□□ 0.32
DDR1-261ENST00000507901 C12orf40Q86WS4 652 aa17.07■□□□□ 0.32
DDR1-261ENST00000507901 ETFBKMTQ8IXQ9 262 aa17.07■□□□□ 0.32
DDR1-261ENST00000507901 DEFB106AQ8N104 65 aa17.07■□□□□ 0.32
DDR1-261ENST00000507901 PHTF2Q8N3S3 785 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms