RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 DQX1Q8TE96 717 aaKnown RBP7.51□□□□□ -1.21
NUP54-204ENST00000506098 EDEM1Q92611 657 aa7.51□□□□□ -1.21
NUP54-204ENST00000506098 PABPC5Q96DU9 382 aaKnown RBP7.51□□□□□ -1.21
NUP54-204ENST00000506098 HES6Q96HZ4 224 aa7.51□□□□□ -1.21
NUP54-204ENST00000506098 ALS2CR12Q96Q35 445 aa7.51□□□□□ -1.21
NUP54-204ENST00000506098 TBCBQ99426 244 aa7.51□□□□□ -1.21
NUP54-204ENST00000506098 CORO1BQ9BR76 489 aa7.51□□□□□ -1.21
NUP54-204ENST00000506098 S1PR5Q9H228 398 aa7.51□□□□□ -1.21
NUP54-204ENST00000506098 SMOC2Q9H3U7 446 aa7.51□□□□□ -1.21
NUP54-204ENST00000506098 IGFLR1Q9H665 355 aa7.51□□□□□ -1.21
NUP54-204ENST00000506098 WDR6Q9NNW5 1121 aaKnown RBP7.51□□□□□ -1.21
NUP54-204ENST00000506098 ASAH2Q9NR71 780 aa7.51□□□□□ -1.21
NUP54-204ENST00000506098 HCFC1R1Q9NWW0 138 aa7.51□□□□□ -1.21
NUP54-204ENST00000506098 CALCOCO1Q9P1Z2 691 aa7.51□□□□□ -1.21
NUP54-204ENST00000506098 ZMYM5Q9UJ78 669 aa7.51□□□□□ -1.21
NUP54-204ENST00000506098 AMFRQ9UKV5 643 aa7.51□□□□□ -1.21
NUP54-204ENST00000506098 JRKLQ9Y4A0 524 aa7.51□□□□□ -1.21
NUP54-204ENST00000506098 COL4A2P08572 1712 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 CCDC66A2RUB6 948 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 MIF4GDA9UHW6 222 aaKnown RBP7.5□□□□□ -1.21
NUP54-204ENST00000506098 M0QYT0 321 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 DDX3YO15523 660 aaKnown RBP7.5□□□□□ -1.21
NUP54-204ENST00000506098 IRAK2O43187 625 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 PSTPIP1O43586 416 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 TLR5O60602 858 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 IGLV3-27P01718 113 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 PRLRP16471 622 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 DDX6P26196 483 aaKnown RBP eCLIP7.5□□□□□ -1.21
NUP54-204ENST00000506098 WEE1P30291 646 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 GBP1P32455 592 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 CTNNA1P35221 906 aaKnown RBP7.5□□□□□ -1.21
NUP54-204ENST00000506098 RDXP35241 583 aaKnown RBP7.5□□□□□ -1.21
NUP54-204ENST00000506098 ATP5C1P36542 298 aaKnown RBP7.5□□□□□ -1.21
NUP54-204ENST00000506098 LTBRP36941 435 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 CCR2P41597 374 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 SSR1P43307 286 aaKnown RBP7.5□□□□□ -1.21
NUP54-204ENST00000506098 CXCR3P49682 368 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 SULT1E1P49888 294 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 PEX5P50542 639 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 VASPP50552 380 aaPredicted RBP7.5□□□□□ -1.21
NUP54-204ENST00000506098 KPNA1P52294 538 aaPredicted RBP7.5□□□□□ -1.21
NUP54-204ENST00000506098 AIF1P55008 147 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 GNG11P61952 73 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 ATP11AP98196 1134 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 SLC25A11Q02978 314 aaKnown RBP7.5□□□□□ -1.21
NUP54-204ENST00000506098 DEUP1Q05D60 604 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 ITIH3Q06033 890 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 RING1Q06587 406 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 PPP2R5DQ14738 602 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 SETDB1Q15047 1291 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 TRIP4Q15650 581 aaPredicted RBP7.5□□□□□ -1.21
NUP54-204ENST00000506098 HABP4Q5JVS0 413 aaKnown RBP7.5□□□□□ -1.21
NUP54-204ENST00000506098 BRMS1LQ5PSV4 323 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 SH3PXD2AQ5TCZ1 1133 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 PEX26Q7Z412 305 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 POLNQ7Z5Q5 900 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 GRASPQ7Z6J2 395 aaPredicted RBP7.5□□□□□ -1.21
NUP54-204ENST00000506098 CPNE8Q86YQ8 564 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 PSTKQ8IV42 348 aaKnown RBP7.5□□□□□ -1.21
NUP54-204ENST00000506098 PLCD3Q8N3E9 789 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 SHKBP1Q8TBC3 707 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 RNF139Q8WU17 664 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 FAM172AQ8WUF8 416 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 TEKT4Q8WW24 435 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 SMG7Q92540 1137 aaKnown RBP7.5□□□□□ -1.21
NUP54-204ENST00000506098 MRPS31Q92665 395 aaKnown RBP7.5□□□□□ -1.21
NUP54-204ENST00000506098 NTAN1Q96AB6 310 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 SLC39A13Q96H72 371 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 MSLNLQ96KJ4 702 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 SERPINB11Q96P15 392 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 WDR24Q96S15 920 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 TLR10Q9BXR5 811 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 RNF38Q9H0F5 515 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 ADAM7Q9H2U9 754 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 GOLPH3Q9H4A6 298 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 CCSER2Q9H7U1 834 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 CLEC1BQ9P126 229 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 DNMT3LQ9UJW3 386 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 USP18Q9UMW8 372 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 TLR6Q9Y2C9 796 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 HBS1LQ9Y450 684 aaKnown RBP7.5□□□□□ -1.21
NUP54-204ENST00000506098 PCDHA3Q9Y5H8 950 aa7.5□□□□□ -1.21
NUP54-204ENST00000506098 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.49□□□□□ -1.21
NUP54-204ENST00000506098 A0A1W2PRU2 124 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 C2orf78A6NCI8 922 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 TMEM110-MUSTN1A8MSY1 372 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 NRG2O14511 850 aaPredicted RBP7.49□□□□□ -1.21
NUP54-204ENST00000506098 MDM4O15151 490 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 FANCGO15287 622 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 COCHO43405 550 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 SPOPO43791 374 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 TBX10O75333 385 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 TBX18O95935 607 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 FTCDO95954 541 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 KRT7P08729 469 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 MYL4P12829 197 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 TCF4P15884 667 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 TCF3P15923 654 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 IL1R2P27930 398 aa7.49□□□□□ -1.21
NUP54-204ENST00000506098 MIPP30301 263 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms