RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 BCAR1P56945 870 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 EIF3EP60228 445 aaKnown RBP8.37□□□□□ -1.07
COL4A5-208ENST00000505728 DYNLT1P63172 113 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 SMAD3P84022 425 aaKnown RBP8.37□□□□□ -1.07
COL4A5-208ENST00000505728 DEUP1Q05D60 604 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 GABPB1Q06547 395 aaPredicted RBP8.37□□□□□ -1.07
COL4A5-208ENST00000505728 MMRN1Q13201 1228 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 XRCC4Q13426 336 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 IKBKEQ14164 716 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 TCTN1Q2MV58 587 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 CTXN3Q4LDR2 81 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 ZC3H12AQ5D1E8 599 aaKnown RBP8.37□□□□□ -1.07
COL4A5-208ENST00000505728 VARS2Q5ST30 1063 aaKnown RBP8.37□□□□□ -1.07
COL4A5-208ENST00000505728 SLC9A4Q6AI14 798 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 CNKSR3Q6P9H4 555 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 VSTM1Q6UX27 236 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 HFE2Q6ZVN8 426 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 TRMT10CQ7L0Y3 403 aaKnown RBP8.37□□□□□ -1.07
COL4A5-208ENST00000505728 BZW1Q7L1Q6 419 aaKnown RBP8.37□□□□□ -1.07
COL4A5-208ENST00000505728 CROCCP2Q86T23 111 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 PQLC3Q8N755 202 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 PLD5Q8N7P1 536 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 PCDH19Q8TAB3 1148 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 UBLCP1Q8WVY7 318 aaPredicted RBP8.37□□□□□ -1.07
COL4A5-208ENST00000505728 RSAD2Q8WXG1 361 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 MYLIPQ8WY64 445 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 P3H4Q92791 437 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 NTAN1Q96AB6 310 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 SCLYQ96I15 445 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 C8orf48Q96LL4 319 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 KCTD15Q96SI1 283 aaPredicted RBP8.37□□□□□ -1.07
COL4A5-208ENST00000505728 TMEM209Q96SK2 561 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 FAM118BQ9BPY3 351 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 DHX35Q9H5Z1 703 aaKnown RBP8.37□□□□□ -1.07
COL4A5-208ENST00000505728 TMEM39AQ9NV64 488 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 GPATCH2LQ9NWQ4 482 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 COMMD8Q9NX08 183 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 DNAJB4Q9UDY4 337 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 TBX21Q9UL17 535 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 TPX2Q9ULW0 747 aaKnown RBP8.37□□□□□ -1.07
COL4A5-208ENST00000505728 AP4E1Q9UPM8 1137 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 NAALADL1Q9UQQ1 740 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 PLAAQ9Y263 795 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 PCDHB5Q9Y5E4 795 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 TANC1Q9C0D5 1861 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 SF3B1O75533 1304 aaKnown RBP eCLIP8.36□□□□□ -1.07
COL4A5-208ENST00000505728 XIRP2A4UGR9 3374 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-208ENST00000505728 BCLAF3A2AJT9 711 aaKnown RBP8.36□□□□□ -1.07
COL4A5-208ENST00000505728 F8W810 466 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 H3BRJ5 948 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 SGK1O00141 431 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 TNFRSF10BO14763 440 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 TRIM66O15016 1216 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 ZNF189O75820 626 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-208ENST00000505728 GALTP07902 379 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 RBP3P10745 1247 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 CYP2F1P24903 491 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 CYP2C18P33260 490 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 ADRA1BP35368 520 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 GRIK1P39086 918 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 HCAR3P49019 387 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 ATXN1P54253 815 aaKnown RBP8.36□□□□□ -1.07
COL4A5-208ENST00000505728 ROR1Q01973 937 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 SCAPQ12770 1279 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 MORF4L2Q15014 288 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 TRIP13Q15645 432 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-208ENST00000505728 UAP1Q16222 522 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-208ENST00000505728 CA9Q16790 459 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 ARL13BQ3SXY8 428 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 SLC39A12Q504Y0 691 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 FAM171A1Q5VUB5 890 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 OTUD1Q5VV17 481 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-208ENST00000505728 SYPL2Q5VXT5 272 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 IZUMO3Q5VZ72 239 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 BSPRYQ5W0U4 402 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 ZNF280DQ6N043 979 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 HIBCHQ6NVY1 386 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-208ENST00000505728 FUT10Q6P4F1 479 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 C4orf22Q6V702 233 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 BHLHA9Q7RTU4 235 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 GPRIN1Q7Z2K8 1008 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 RELL1Q8IUW5 271 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 LRRC43Q8N309 656 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 MAFAQ8NHW3 353 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-208ENST00000505728 SLC7A14Q8TBB6 771 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 C2orf15Q8WU43 125 aaKnown RBP8.36□□□□□ -1.07
COL4A5-208ENST00000505728 HAUS1Q96CS2 278 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 ADAM33Q9BZ11 813 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 PPP1R12CQ9BZL4 782 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 PABPC3Q9H361 631 aaKnown RBP8.36□□□□□ -1.07
COL4A5-208ENST00000505728 FBXO44Q9H4M3 255 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 ABCC13Q9NSE7 274 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 TMEM30AQ9NV96 361 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 MARCH5Q9NX47 278 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 FBXW11Q9UKB1 542 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 ATP8A1Q9Y2Q0 1164 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 NFS1Q9Y697 457 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 NUP205Q92621 2012 aa8.36□□□□□ -1.07
COL4A5-208ENST00000505728 NCOR1O75376 2440 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms