RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 SEC23BQ15437 767 aa4.54□□□□□ -1.68
CHD1-203ENST00000505657 GGT6Q6P531 493 aa4.54□□□□□ -1.68
CHD1-203ENST00000505657 PTF1AQ7RTS3 328 aa4.54□□□□□ -1.68
CHD1-203ENST00000505657 GALNT4Q8N4A0 578 aa4.54□□□□□ -1.68
CHD1-203ENST00000505657 SAMD3Q8N6K7 520 aa4.54□□□□□ -1.68
CHD1-203ENST00000505657 C12orf76Q8N812 135 aaPredicted RBP4.54□□□□□ -1.68
CHD1-203ENST00000505657 VPS50Q96JG6 964 aa4.54□□□□□ -1.68
CHD1-203ENST00000505657 ASB2Q96Q27 587 aa4.54□□□□□ -1.68
CHD1-203ENST00000505657 SH2D3AQ9BRG2 576 aa4.54□□□□□ -1.68
CHD1-203ENST00000505657 FZD4Q9ULV1 537 aa4.54□□□□□ -1.68
CHD1-203ENST00000505657 VPS4AQ9UN37 437 aa4.54□□□□□ -1.68
CHD1-203ENST00000505657 SCAF8Q9UPN6 1271 aaKnown RBP4.54□□□□□ -1.68
CHD1-203ENST00000505657 H3BNC9 293 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 ASNA1O43681 348 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 TAF5LO75529 589 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 GCATO75600 419 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 USP1O94782 785 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 TNFRSF6BO95407 300 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 TMIGD3P0DMS9 266 aaPredicted RBP4.53□□□□□ -1.68
CHD1-203ENST00000505657 KLRK1P26718 216 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 CD38P28907 300 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 PDIA3P30101 505 aaKnown RBP4.53□□□□□ -1.68
CHD1-203ENST00000505657 CCDC15Q0P6D6 951 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 GALNT1Q10472 559 aaPredicted RBP4.53□□□□□ -1.68
CHD1-203ENST00000505657 SLC10A2Q12908 348 aaPredicted RBP4.53□□□□□ -1.68
CHD1-203ENST00000505657 FOXF2Q12947 444 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 SLC14A1Q13336 389 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 KCNB1Q14721 858 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 GRM4Q14833 912 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 CEP78Q5JTW2 689 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 DENND2CQ68D51 928 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 MSANTD2Q6P1R3 559 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 TMEM65Q6PI78 240 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 C1orf228Q6PIY5 440 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 DCDC5Q6ZRR9 648 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 GLCCI1Q86VQ1 547 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 RASGRP3Q8IV61 690 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 CLASRPQ8N2M8 674 aaKnown RBP4.53□□□□□ -1.68
CHD1-203ENST00000505657 C8orf58Q8NAV2 365 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 PNISRQ8TF01 805 aaKnown RBP4.53□□□□□ -1.68
CHD1-203ENST00000505657 POF1BQ8WVV4 589 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 MCRS1Q96EZ8 462 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 C5orf34Q96MH7 638 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 OBP2BQ9NPH6 170 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 PLCB1Q9NQ66 1216 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 PDGFCQ9NRA1 345 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 TFCP2L1Q9NZI6 479 aa4.53□□□□□ -1.68
CHD1-203ENST00000505657 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.52□□□□□ -1.69
CHD1-203ENST00000505657 C16orf96A6NNT2 1141 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 LGALS16A8MUM7 142 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 CLIC1O00299 241 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 NPC1O15118 1278 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 NPPBP16860 134 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 DGKQP52824 942 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 TNFAIP2Q03169 654 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 GRM1Q13255 1194 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 GAB1Q13480 694 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 P3H1Q32P28 736 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 TUBB8Q3ZCM7 444 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 ARL6IP4Q66PJ3 421 aaKnown RBP4.52□□□□□ -1.69
CHD1-203ENST00000505657 CCDC144NLQ6NUI1 221 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 C16orf89Q6UX73 402 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 OR1N1Q8NGS0 311 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 ADAMTS18Q8TE60 1221 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 CCDC17Q96LX7 622 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 HS6ST2Q96MM7 605 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 EFHD1Q9BUP0 239 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 GAR1Q9NY12 217 aaKnown RBP4.52□□□□□ -1.69
CHD1-203ENST00000505657 SEMA5BQ9P283 1151 aa4.52□□□□□ -1.69
CHD1-203ENST00000505657 MAGED2Q9UNF1 606 aaPredicted RBP4.52□□□□□ -1.69
CHD1-203ENST00000505657 CCDC187A0A096LP49 1063 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 GOLGA6L3A6NEY3 463 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 BTBD19C9JJ37 291 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 FFAR2O15552 330 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 CTIFO43310 598 aaKnown RBP4.51□□□□□ -1.69
CHD1-203ENST00000505657 NTSR2O95665 410 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 ANXA6P08133 673 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 ITGA5P08648 1049 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 CHRM5P08912 532 aaPredicted RBP4.51□□□□□ -1.69
CHD1-203ENST00000505657 KRTAP10-9P60411 292 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 KRTAP10-11P60412 298 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 SRSF4Q08170 494 aaKnown RBP4.51□□□□□ -1.69
CHD1-203ENST00000505657 SEMA3BQ13214 749 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 MORC3Q14149 939 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 TLDC1Q6P9B6 456 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 SRRM1Q8IYB3 904 aaKnown RBP4.51□□□□□ -1.69
CHD1-203ENST00000505657 FAM71DQ8N9W8 422 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 ZNF527Q8NB42 609 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 NGDNQ8NEJ9 315 aaKnown RBP4.51□□□□□ -1.69
CHD1-203ENST00000505657 FYTTD1Q96QD9 318 aaKnown RBP4.51□□□□□ -1.69
CHD1-203ENST00000505657 PRPF18Q99633 342 aaKnown RBP4.51□□□□□ -1.69
CHD1-203ENST00000505657 NUDT22Q9BRQ3 303 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 QTRT1Q9BXR0 403 aaKnown RBP4.51□□□□□ -1.69
CHD1-203ENST00000505657 ABHD10Q9NUJ1 306 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 FLRT1Q9NZU1 646 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 KLHL13Q9P2N7 655 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 CA14Q9ULX7 337 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 LRCH1Q9Y2L9 728 aa4.51□□□□□ -1.69
CHD1-203ENST00000505657 PNMA6EA0A0J9YXQ4 647 aa4.5□□□□□ -1.69
CHD1-203ENST00000505657 GXYLT2A0PJZ3 443 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms