RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 CD93Q9NPY3 652 aa12.83□□□□□ -0.36
SNHG4-202ENST00000505522 CISHQ9NSE2 258 aa12.83□□□□□ -0.36
SNHG4-202ENST00000505522 RAB20Q9NX57 234 aa12.83□□□□□ -0.36
SNHG4-202ENST00000505522 CACNA2D2Q9NY47 1150 aa12.83□□□□□ -0.36
SNHG4-202ENST00000505522 RASAL2Q9UJF2 1139 aa12.83□□□□□ -0.36
SNHG4-202ENST00000505522 FBXO10Q9UK96 956 aa12.83□□□□□ -0.36
SNHG4-202ENST00000505522 CYP8B1Q9UNU6 501 aa12.83□□□□□ -0.36
SNHG4-202ENST00000505522 CEP192Q8TEP8 1941 aa12.82□□□□□ -0.36
SNHG4-202ENST00000505522 IGHV1OR15-9A0A0B4J2B8 117 aa12.82□□□□□ -0.36
SNHG4-202ENST00000505522 WASH3PC4AMC7 463 aa12.82□□□□□ -0.36
SNHG4-202ENST00000505522 AP5Z1O43299 807 aa12.82□□□□□ -0.36
SNHG4-202ENST00000505522 EPB41P11171 864 aaKnown RBP12.82□□□□□ -0.36
SNHG4-202ENST00000505522 CEACAM1P13688 526 aa12.82□□□□□ -0.36
SNHG4-202ENST00000505522 ENGP17813 658 aa12.82□□□□□ -0.36
SNHG4-202ENST00000505522 CSRP1P21291 193 aaKnown RBP12.82□□□□□ -0.36
SNHG4-202ENST00000505522 PRCPP42785 496 aa12.82□□□□□ -0.36
SNHG4-202ENST00000505522 RAB41Q5JT25 222 aa12.82□□□□□ -0.36
SNHG4-202ENST00000505522 FYB2Q5VWT5 728 aa12.82□□□□□ -0.36
SNHG4-202ENST00000505522 SLC36A4Q6YBV0 504 aa12.82□□□□□ -0.36
SNHG4-202ENST00000505522 TADA2BQ86TJ2 420 aa12.82□□□□□ -0.36
SNHG4-202ENST00000505522 PIGZQ86VD9 579 aa12.82□□□□□ -0.36
SNHG4-202ENST00000505522 SLC41A1Q8IVJ1 513 aa12.82□□□□□ -0.36
SNHG4-202ENST00000505522 DEFB124Q8NES8 71 aa12.82□□□□□ -0.36
SNHG4-202ENST00000505522 FAXDC2Q96IV6 333 aa12.82□□□□□ -0.36
SNHG4-202ENST00000505522 DNAI2Q9GZS0 605 aa12.82□□□□□ -0.36
SNHG4-202ENST00000505522 WASF3Q9UPY6 502 aa12.82□□□□□ -0.36
SNHG4-202ENST00000505522 TULP2O00295 520 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 CETN3O15182 167 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 ZNF217O75362 1048 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 TOP3BO95985 862 aaKnown RBP12.81□□□□□ -0.36
SNHG4-202ENST00000505522 PENKP01210 267 aaPredicted RBP12.81□□□□□ -0.36
SNHG4-202ENST00000505522 CFIP05156 583 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 SPINK2P20155 84 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 CORO1AP31146 461 aaKnown RBP12.81□□□□□ -0.36
SNHG4-202ENST00000505522 DPP6P42658 865 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 COG7P83436 770 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 ZNF33AQ06730 810 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 FOXC1Q12948 553 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 DUOXA1Q1HG43 343 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 CBWD6Q4V339 395 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 CBWD3Q5JTY5 395 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 CBWD5Q5RIA9 395 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 ARHGAP17Q68EM7 881 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 DENND1CQ8IV53 801 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 TTC39CQ8N584 583 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 NDRG1Q92597 394 aaKnown RBP12.81□□□□□ -0.36
SNHG4-202ENST00000505522 MRGPRX1Q96LB2 322 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 CDK5RAP1Q96SZ6 601 aaKnown RBP12.81□□□□□ -0.36
SNHG4-202ENST00000505522 UBXN6Q9BZV1 441 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 MARCH2Q9P0N8 246 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 AGO1Q9UL18 857 aaKnown RBP12.81□□□□□ -0.36
SNHG4-202ENST00000505522 ZNF510Q9Y2H8 683 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 SLC27A6Q9Y2P4 619 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 ATP6V1DQ9Y5K8 247 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 USP24Q9UPU5 2620 aa12.81□□□□□ -0.36
SNHG4-202ENST00000505522 ADAMTS9Q9P2N4 1935 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 SLC12A8A0AV02 714 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 GFRA2O00451 464 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 ZBTB24O43167 697 aaPredicted RBP12.8□□□□□ -0.36
SNHG4-202ENST00000505522 STX10O60499 249 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 HOXD12P35452 270 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 TKTL1P51854 596 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 PMS1P54277 932 aaKnown RBP12.8□□□□□ -0.36
SNHG4-202ENST00000505522 MFAP3P55082 362 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 YWHAGP61981 247 aaKnown RBP eCLIP12.8□□□□□ -0.36
SNHG4-202ENST00000505522 GEN1Q17RS7 908 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 TCERG1LQ5VWI1 586 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 PM20D1Q6GTS8 502 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 BHLHA9Q7RTU4 235 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 ZC3H3Q8IXZ2 948 aaKnown RBP12.8□□□□□ -0.36
SNHG4-202ENST00000505522 ARHGAP18Q8N392 663 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 ANKRD52Q8NB46 1076 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 PIWIL1Q96J94 861 aaKnown RBP12.8□□□□□ -0.36
SNHG4-202ENST00000505522 HSPA12BQ96MM6 686 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 DCLK3Q9C098 648 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 CAPN10Q9HC96 672 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 CLEC4EQ9ULY5 219 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 SLC6A14Q9UN76 642 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 COQ4Q9Y3A0 265 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 STON1Q9Y6Q2 735 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 PCDH15Q96QU1 1955 aa12.8□□□□□ -0.36
SNHG4-202ENST00000505522 CFAP47Q6ZTR5 3102 aa12.79□□□□□ -0.36
SNHG4-202ENST00000505522 ZBED1O96006 694 aa12.79□□□□□ -0.36
SNHG4-202ENST00000505522 SERPINF2P08697 491 aa12.79□□□□□ -0.36
SNHG4-202ENST00000505522 CHKAP35790 457 aa12.79□□□□□ -0.36
SNHG4-202ENST00000505522 IL12RB1P42701 662 aa12.79□□□□□ -0.36
SNHG4-202ENST00000505522 GFPT1Q06210 699 aaPredicted RBP12.79□□□□□ -0.36
SNHG4-202ENST00000505522 PDE4CQ08493 712 aa12.79□□□□□ -0.36
SNHG4-202ENST00000505522 SEMA3BQ13214 749 aa12.79□□□□□ -0.36
SNHG4-202ENST00000505522 CUL2Q13617 745 aa12.79□□□□□ -0.36
SNHG4-202ENST00000505522 GOLGA7BQ2TAP0 167 aa12.79□□□□□ -0.36
SNHG4-202ENST00000505522 FUT11Q495W5 492 aa12.79□□□□□ -0.36
SNHG4-202ENST00000505522 COBLL1Q53SF7 1204 aa12.79□□□□□ -0.36
SNHG4-202ENST00000505522 DCAF17Q5H9S7 520 aaPredicted RBP12.79□□□□□ -0.36
SNHG4-202ENST00000505522 ZNF658Q5TYW1 1059 aaPredicted RBP12.79□□□□□ -0.36
SNHG4-202ENST00000505522 ANKRD40Q6AI12 368 aa12.79□□□□□ -0.36
SNHG4-202ENST00000505522 KIAA1324Q6UXG2 1013 aaKnown RBP12.79□□□□□ -0.36
SNHG4-202ENST00000505522 RSRC2Q7L4I2 434 aaKnown RBP12.79□□□□□ -0.36
SNHG4-202ENST00000505522 PIP4P1Q86T03 277 aa12.79□□□□□ -0.36
SNHG4-202ENST00000505522 FMR1NBQ8N0W7 255 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms