RNA–Protein interactions for RNA: ENST00000504872.5

APBB3-209, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-209	ENST00000504872	NAGPA	Q9UK23	515 aa		11.22	□□□□□ -0.61
APBB3-209	ENST00000504872	CPQ	Q9Y646	472 aa		11.22	□□□□□ -0.61
APBB3-209	ENST00000504872	MYH10	P35580	1976 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	KRBA1	A5PL33	1030 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	OTOL1	A6NHN0	477 aa	Predicted RBP	11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	DPYSL4	O14531	572 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	ZNF263	O14978	683 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	SART1	O43290	800 aa	Known RBP	11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	CBFA2T2	O43439	604 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	ABL1	P00519	1130 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	LTF	P02788	710 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	KLKB1	P03952	638 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	ERBB2	P04626	1255 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	CKM	P06732	381 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	CCDC172	P0C7W6	258 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	RALA	P11233	206 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	GLUL	P15104	373 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	SDHB	P21912	280 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	MMP8	P22894	467 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	SCNN1A	P37088	669 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	STARD6	P59095	220 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	YWHAZ	P63104	245 aa	Known RBP	11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	PLCB2	Q00722	1185 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	GRM2	Q14416	872 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	TAF5	Q15542	800 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	SLC44A4	Q53GD3	710 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	TAF3	Q5VWG9	929 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	SYPL2	Q5VXT5	272 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872		Q6ZNB5	142 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	SLC26A9	Q7LBE3	791 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	ARC	Q7LC44	396 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	FMNL3	Q8IVF7	1028 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	DRC7	Q8IY82	874 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	ZNF687	Q8N1G0	1237 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	SIX6OS1	Q8N1H7	587 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	C1orf131	Q8NDD1	294 aa	Known RBP	11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	DNASE1L2	Q92874	299 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	IRF7	Q92985	503 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	NT5C3B	Q969T7	300 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	CHFR	Q96EP1	664 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	PIWIL1	Q96J94	861 aa	Known RBP	11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	MIS12	Q9H081	205 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	NUCKS1	Q9H1E3	243 aa	Known RBP	11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	MFSD1	Q9H3U5	465 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	HPS4	Q9NQG7	708 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	ST7	Q9NRC1	585 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	DNMT3L	Q9UJW3	386 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	NUDT5	Q9UKK9	219 aa		11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	LUC7L2	Q9Y383	392 aa	Known RBP	11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
APBB3-209	ENST00000504872	NUP210	Q8TEM1	1887 aa	Predicted RBP	11.21	□□□□□ -0.62
APBB3-209	ENST00000504872	TCRBV5S1A1T	A0A578	114 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	GFRA2	O00451	464 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	PIK3R2	O00459	728 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	STC2	O76061	302 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	IGLV3-25	P01717	112 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	IGLV3-27	P01718	113 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	SP9	P0CG40	484 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	MBL2	P11226	248 aa	Predicted RBP	11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	GZMA	P12544	262 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	GDI1	P31150	447 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	CASP14	P31944	242 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	GSC	P56915	257 aa	Predicted RBP	11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	COG7	P83436	770 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	PFKP	Q01813	784 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	SLC6A3	Q01959	620 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	CENPC	Q03188	943 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	FZD5	Q13467	585 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	TRIP4	Q15650	581 aa	Predicted RBP	11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	CLEC16A	Q2KHT3	1053 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	EML3	Q32P44	896 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	EFHC1	Q5JVL4	640 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	C10orf120	Q5SQS8	335 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	SFMBT2	Q5VUG0	894 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	BTBD8	Q5XKL5	378 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	SPECC1L	Q69YQ0	1117 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	WDR59	Q6PJI9	974 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	OLFML1	Q6UWY5	402 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	TRIM72	Q6ZMU5	477 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	ERICH1	Q86X53	443 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	DDX42	Q86XP3	938 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	XYLT1	Q86Y38	959 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	PHF13	Q86YI8	300 aa	Predicted RBP	11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	ZDHHC17	Q8IUH5	632 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	PASD1	Q8IV76	773 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	OSCP1	Q8WVF1	389 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	CPA5	Q8WXQ8	436 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	C18orf8	Q96DM3	657 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	SLC39A13	Q96H72	371 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	SLC2A13	Q96QE2	648 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	DNAJC7	Q99615	494 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	HAUS4	Q9H6D7	363 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	BRD9	Q9H8M2	597 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	OLA1	Q9NTK5	396 aa	Known RBP	11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	THG1L	Q9NWX6	298 aa	Known RBP	11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	TMEM59L	Q9UK28	342 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	CACNA1I	Q9P0X4	2223 aa		11.2	□□□□□ -0.62
APBB3-209	ENST00000504872	KIF26A	Q9ULI4	1882 aa	Predicted RBP	11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms