RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 NEDD8-MDP1E9PL57 170 aa26.55■■□□□ 1.84
PVT1-201ENST00000504719 PES1O00541 588 aaKnown RBP26.55■■□□□ 1.84
PVT1-201ENST00000504719 CACNG3O60359 315 aa26.55■■□□□ 1.84
PVT1-201ENST00000504719 LETM1O95202 739 aaPredicted RBP26.55■■□□□ 1.84
PVT1-201ENST00000504719 HMBSP08397 361 aa26.55■■□□□ 1.84
PVT1-201ENST00000504719 TYRP14679 529 aa26.55■■□□□ 1.84
PVT1-201ENST00000504719 PMF1Q6P1K2 205 aa26.55■■□□□ 1.84
PVT1-201ENST00000504719 SIX6OS1Q8N1H7 587 aa26.55■■□□□ 1.84
PVT1-201ENST00000504719 ALLCQ8N6M5 410 aa26.55■■□□□ 1.84
PVT1-201ENST00000504719 TERB1Q8NA31 727 aa26.55■■□□□ 1.84
PVT1-201ENST00000504719 TXNDC5Q8NBS9 432 aaKnown RBP26.55■■□□□ 1.84
PVT1-201ENST00000504719 XPO6Q96QU8 1125 aaKnown RBP26.55■■□□□ 1.84
PVT1-201ENST00000504719 DCLK3Q9C098 648 aa26.55■■□□□ 1.84
PVT1-201ENST00000504719 UBE2TQ9NPD8 197 aaPredicted RBP26.55■■□□□ 1.84
PVT1-201ENST00000504719 CNGB3Q9NQW8 809 aa26.55■■□□□ 1.84
PVT1-201ENST00000504719 STRIP2Q9ULQ0 834 aa26.55■■□□□ 1.84
PVT1-201ENST00000504719 SLC12A8A0AV02 714 aa26.54■■□□□ 1.84
PVT1-201ENST00000504719 M0QYV0 167 aa26.54■■□□□ 1.84
PVT1-201ENST00000504719 TRIM24O15164 1050 aa26.54■■□□□ 1.84
PVT1-201ENST00000504719 GABBR2O75899 941 aa26.54■■□□□ 1.84
PVT1-201ENST00000504719 KLF8O95600 359 aaPredicted RBP26.54■■□□□ 1.84
PVT1-201ENST00000504719 LCP1P13796 627 aa26.54■■□□□ 1.84
PVT1-201ENST00000504719 CORO1AP31146 461 aaKnown RBP26.54■■□□□ 1.84
PVT1-201ENST00000504719 CRY1Q16526 586 aa26.54■■□□□ 1.84
PVT1-201ENST00000504719 GRAMD4Q6IC98 578 aa26.54■■□□□ 1.84
PVT1-201ENST00000504719 NUDT18Q6ZVK8 323 aa26.54■■□□□ 1.84
PVT1-201ENST00000504719 CACNA2D4Q7Z3S7 1137 aa26.54■■□□□ 1.84
PVT1-201ENST00000504719 NAT10Q9H0A0 1025 aaKnown RBP26.54■■□□□ 1.84
PVT1-201ENST00000504719 OLA1Q9NTK5 396 aaKnown RBP26.54■■□□□ 1.84
PVT1-201ENST00000504719 DNAJC17Q9NVM6 304 aaKnown RBP26.54■■□□□ 1.84
PVT1-201ENST00000504719 TAB2Q9NYJ8 693 aa26.54■■□□□ 1.84
PVT1-201ENST00000504719 SYCE3A1L190 88 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 YJEFN3A6XGL0 299 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 E7ENQ6 273 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 SGK1O00141 431 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 LRP3O75074 770 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 PON1P27169 355 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 RGS7P49802 495 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 DGKEP52429 567 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 DAOAP59103 153 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 APBA1Q02410 837 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 SPEM2Q0P670 501 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 BSPRYQ5W0U4 402 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 TMEM92Q6UXU6 159 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 KBTBD6Q86V97 674 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 RASSF3Q86WH2 238 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 AOPEPQ8N6M6 819 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 KCNV2Q8TDN2 545 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 RMDN1Q96DB5 314 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 AGO1Q9UL18 857 aaKnown RBP26.53■■□□□ 1.84
PVT1-201ENST00000504719 USP18Q9UMW8 372 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 SDK1Q7Z5N4 2213 aa26.53■■□□□ 1.84
PVT1-201ENST00000504719 HNRNPLP14866 589 aaKnown RBP eCLIP26.52■■□□□ 1.846e-25■■■□□ 16
PVT1-201ENST00000504719 CHKAP35790 457 aa26.52■■□□□ 1.84
PVT1-201ENST00000504719 SKOR2Q2VWA4 1001 aaPredicted RBP26.52■■□□□ 1.84
PVT1-201ENST00000504719 EOGTQ5NDL2 527 aa26.52■■□□□ 1.84
PVT1-201ENST00000504719 C10orf76Q5T2E6 689 aa26.52■■□□□ 1.84
PVT1-201ENST00000504719 GJB7Q6PEY0 223 aa26.52■■□□□ 1.84
PVT1-201ENST00000504719 PLD4Q96BZ4 506 aa26.52■■□□□ 1.84
PVT1-201ENST00000504719 P2RY11Q96G91 374 aa26.52■■□□□ 1.84
PVT1-201ENST00000504719 HSFY1Q96LI6 401 aa26.52■■□□□ 1.84
PVT1-201ENST00000504719 ZDHHC4Q9NPG8 344 aa26.52■■□□□ 1.84
PVT1-201ENST00000504719 ABCC13Q9NSE7 274 aa26.52■■□□□ 1.84
PVT1-201ENST00000504719 APEX2Q9UBZ4 518 aa26.52■■□□□ 1.84
PVT1-201ENST00000504719 HCN2Q9UL51 889 aa26.52■■□□□ 1.84
PVT1-201ENST00000504719 STARD13Q9Y3M8 1113 aa26.52■■□□□ 1.84
PVT1-201ENST00000504719 DMXL1Q9Y485 3027 aa26.52■■□□□ 1.84
PVT1-201ENST00000504719 ADAM23O75077 832 aa26.51■■□□□ 1.83
PVT1-201ENST00000504719 CISD3P0C7P0 127 aa26.51■■□□□ 1.83
PVT1-201ENST00000504719 KRT5P13647 590 aa26.51■■□□□ 1.83
PVT1-201ENST00000504719 NCAPHQ15003 741 aa26.51■■□□□ 1.83
PVT1-201ENST00000504719 KRT31Q15323 416 aa26.51■■□□□ 1.83
PVT1-201ENST00000504719 TRIP4Q15650 581 aaPredicted RBP26.51■■□□□ 1.83
PVT1-201ENST00000504719 ENOSF1Q7L5Y1 443 aa26.51■■□□□ 1.83
PVT1-201ENST00000504719 FMNL3Q8IVF7 1028 aa26.51■■□□□ 1.83
PVT1-201ENST00000504719 IRGQQ8WZA9 623 aa26.51■■□□□ 1.83
PVT1-201ENST00000504719 EDEM1Q92611 657 aa26.51■■□□□ 1.83
PVT1-201ENST00000504719 LOXL4Q96JB6 756 aa26.51■■□□□ 1.83
PVT1-201ENST00000504719 ZC3H10Q96K80 434 aaKnown RBP26.51■■□□□ 1.83
PVT1-201ENST00000504719 FUCA2Q9BTY2 467 aa26.51■■□□□ 1.83
PVT1-201ENST00000504719 FBXO10Q9UK96 956 aa26.51■■□□□ 1.83
PVT1-201ENST00000504719 DCHS1Q96JQ0 3298 aa26.5■■□□□ 1.83
PVT1-201ENST00000504719 PIK3R2O00459 728 aa26.5■■□□□ 1.83
PVT1-201ENST00000504719 MFAP3P55082 362 aa26.5■■□□□ 1.83
PVT1-201ENST00000504719 ANO7Q6IWH7 933 aa26.5■■□□□ 1.83
PVT1-201ENST00000504719 DENND1CQ8IV53 801 aa26.5■■□□□ 1.83
PVT1-201ENST00000504719 ZNF513Q8N8E2 541 aaPredicted RBP26.5■■□□□ 1.83
PVT1-201ENST00000504719 RNF139Q8WU17 664 aa26.5■■□□□ 1.83
PVT1-201ENST00000504719 FAM81BQ96LP2 452 aa26.5■■□□□ 1.83
PVT1-201ENST00000504719 BPIFA3Q9BQP9 254 aa26.5■■□□□ 1.83
PVT1-201ENST00000504719 VPS16Q9H269 839 aa26.5■■□□□ 1.83
PVT1-201ENST00000504719 PLK2Q9NYY3 685 aa26.5■■□□□ 1.83
PVT1-201ENST00000504719 SFMBT1Q9UHJ3 866 aa26.5■■□□□ 1.83
PVT1-201ENST00000504719 HBS1LQ9Y450 684 aaKnown RBP26.5■■□□□ 1.83
PVT1-201ENST00000504719 PENKP01210 267 aaPredicted RBP26.49■■□□□ 1.83
PVT1-201ENST00000504719 DGKGP49619 791 aa26.49■■□□□ 1.83
PVT1-201ENST00000504719 PLK5Q496M5 336 aa26.49■■□□□ 1.83
PVT1-201ENST00000504719 FYB2Q5VWT5 728 aa26.49■■□□□ 1.83
PVT1-201ENST00000504719 TOGARAM2Q6ZUX3 1019 aa26.49■■□□□ 1.83
PVT1-201ENST00000504719 TRMT11Q7Z4G4 463 aaKnown RBP26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms