RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 VPS50Q96JG6 964 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 SF3B5Q9BWJ5 86 aaKnown RBP2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 SLC12A5Q9H2X9 1139 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 PRDM16Q9HAZ2 1276 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 PCDH12Q9NPG4 1184 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 PLSCR4Q9NRQ2 329 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 HOMER2Q9NSB8 354 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 NKX1-2Q9UD57 310 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 COL4A3BPQ9Y5P4 624 aa2.46□□□□□ -2.02
HMGB3P17-201ENST00000504195 CENPJQ9HC77 1338 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 A8MVJ9 347 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 PHGDHO43175 533 aaKnown RBP2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 RRP9O43818 475 aaKnown RBP2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 UBXN7O94888 489 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 HSPA6P17066 643 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 EN2P19622 333 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 ADRA1DP25100 572 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 CALRP27797 417 aaKnown RBP2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 ARRB2P32121 409 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 MMP14P50281 582 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 GATMP50440 423 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 NEK2P51955 445 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 PGDP52209 483 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 TXNL4AP83876 142 aaKnown RBP2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 ST3GAL2Q16842 350 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 BRDTQ58F21 947 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 SLC39A5Q6ZMH5 540 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 RFX8Q6ZV50 586 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 PNPLA1Q8N8W4 532 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 ZCRB1Q8TBF4 217 aaKnown RBP2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 SMCR8Q8TEV9 937 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 ASB5Q8WWX0 329 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 EDC3Q96F86 508 aaKnown RBP2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 SUCLG2Q96I99 432 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 ZNF668Q96K58 619 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 ZBTB45Q96K62 511 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 ZCWPW1Q9H0M4 648 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 ZMAT3Q9HA38 289 aaKnown RBP2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 SMURF2Q9HAU4 748 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 USP29Q9HBJ7 922 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 NMRK2Q9NPI5 230 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 TMEM45AQ9NWC5 275 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 GABBR1Q9UBS5 961 aa2.45□□□□□ -2.02
HMGB3P17-201ENST00000504195 MBD3L4A6NDZ8 208 aaPredicted RBP2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 MBD3L3A6NE82 208 aaPredicted RBP2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 FYB1O15117 783 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 AKAP10O43572 662 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 SNX2O60749 519 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 RASSF9O75901 435 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 PIAS2O75928 621 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 EPN2O95208 641 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 PLAUP00749 431 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 PARP1P09874 1014 aaKnown RBP2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 HGFP14210 728 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 KLRC1P26715 233 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 SLC7A1P30825 629 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 PTDSS1P48651 473 aaKnown RBP2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 POLD2P49005 469 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 ITGA8P53708 1063 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 KRTAP10-8P60410 259 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 FAM193AP78312 1265 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 CALD1Q05682 793 aaKnown RBP2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 KPNB1Q14974 876 aaKnown RBP2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 ANO6Q4KMQ2 910 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 LCE3CQ5T5A8 94 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 TMED8Q6PL24 325 aaPredicted RBP2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 CASC1Q6TDU7 716 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 ZDHHC24Q6UX98 284 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 FAM57BQ71RH2 274 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 KCTD20Q7Z5Y7 419 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 CHPFQ8IZ52 775 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 FAM71DQ8N9W8 422 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 OR56A3Q8NH54 315 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 ELP5Q8TE02 316 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 SECISBP2LQ93073 1101 aaKnown RBP2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 HOOK2Q96ED9 719 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 NT5C1BQ96P26 610 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 CINPQ9BW66 212 aaPredicted RBP2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 SCNM1Q9BWG6 230 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 NUAK2Q9H093 628 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 RBM38Q9H0Z9 239 aaKnown RBP2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 DHX36Q9H2U1 1008 aaKnown RBP2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 CDCP1Q9H5V8 836 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 C6orf106Q9H6K1 298 aaPredicted RBP2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 ARL8BQ9NVJ2 186 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 STEAP1Q9UHE8 339 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 HDAC9Q9UKV0 1011 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 PNMA8BQ9ULN7 279 aaPredicted RBP2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 FZD4Q9ULV1 537 aa2.44□□□□□ -2.02
HMGB3P17-201ENST00000504195 AQP7P3A6NL99 342 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 C2CD4BA6NLJ0 364 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 TTC36A6NLP5 189 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 F8W810 466 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 H7C4K7 107 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 PYCARD-AS1I3L0S3 204 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 TLX3O43711 291 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 NDUFB8O95169 186 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 UMODP07911 640 aa2.43□□□□□ -2.02
HMGB3P17-201ENST00000504195 MCM5P33992 734 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms