RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 PTPRN2Q92932 1015 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 XAB2Q9HCS7 855 aaKnown RBP17.16■□□□□ 0.34
VCAN-204ENST00000502527 ALG13Q9NP73 1137 aaKnown RBP17.16■□□□□ 0.34
VCAN-204ENST00000502527 SAR1AQ9NR31 198 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 MTMR10Q9NXD2 777 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 SMIM28A0A1B0GU29 152 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 MBLAC1A4D2B0 266 aaPredicted RBP17.16■□□□□ 0.34
VCAN-204ENST00000502527 HCRTO43612 131 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 TGDSO95455 350 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 METTL18O95568 372 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 LMO2P25791 158 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 ATXN1P54253 815 aaKnown RBP17.16■□□□□ 0.34
VCAN-204ENST00000502527 TAF1BQ53T94 588 aaPredicted RBP17.16■□□□□ 0.34
VCAN-204ENST00000502527 PLEKHG4Q58EX7 1191 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 EFHC1Q5JVL4 640 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 HEATR6Q6AI08 1181 aaKnown RBP17.16■□□□□ 0.34
VCAN-204ENST00000502527 KCNT2Q6UVM3 1135 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 STRADAQ7RTN6 431 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 PLEKHH3Q7Z736 793 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 APPL2Q8NEU8 664 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 BRI3BPQ8WY22 251 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 TTC17Q96AE7 1141 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 MTBPQ96DY7 904 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 SRPK1Q96SB4 655 aaKnown RBP17.16■□□□□ 0.34
VCAN-204ENST00000502527 KCTD15Q96SI1 283 aaPredicted RBP17.16■□□□□ 0.34
VCAN-204ENST00000502527 EBNA1BP2Q99848 306 aaKnown RBP17.16■□□□□ 0.34
VCAN-204ENST00000502527 SPON1Q9HCB6 807 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 SLC5A4Q9NY91 659 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 DCTN4Q9UJW0 460 aa17.16■□□□□ 0.34
VCAN-204ENST00000502527 SCN1AP35498 2009 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 RALGAPA2Q2PPJ7 1873 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 CXorf49A8MYA2 514 aaPredicted RBP17.15■□□□□ 0.34
VCAN-204ENST00000502527 DYNC1LI2O43237 492 aaPredicted RBP17.15■□□□□ 0.34
VCAN-204ENST00000502527 HNRNPCL1O60812 293 aaKnown RBP17.15■□□□□ 0.34
VCAN-204ENST00000502527 KRT38O76015 456 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 WFS1O76024 890 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 IL1BP01584 269 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 T-ENOLP0DO92 83 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 SERPINB4P48594 390 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 SARNPP82979 210 aaKnown RBP17.15■□□□□ 0.34
VCAN-204ENST00000502527 OVGP1Q12889 678 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 PRKD1Q15139 912 aaPredicted RBP17.15■□□□□ 0.34
VCAN-204ENST00000502527 UNC5AQ6ZN44 842 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 BZW1Q7L1Q6 419 aaKnown RBP17.15■□□□□ 0.34
VCAN-204ENST00000502527 RPAINQ86UA6 219 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 MTDHQ86UE4 582 aaKnown RBP17.15■□□□□ 0.34
VCAN-204ENST00000502527 RFWD2Q8NHY2 731 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 GSDMBQ8TAX9 411 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 SLC2A14Q8TDB8 520 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 LRRN4Q8WUT4 740 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 TNIP3Q96KP6 325 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 SIGLEC10Q96LC7 697 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 PRDM16Q9HAZ2 1276 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 PLAC1Q9HBJ0 212 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 GJD2Q9UKL4 321 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 MAD1L1Q9Y6D9 718 aa17.15■□□□□ 0.34
VCAN-204ENST00000502527 A8MUI8 341 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 HACD1B0YJ81 288 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 KLF11O14901 512 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 F2P00734 622 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 KCNE1P15382 129 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 MAP2K2P36507 400 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 ARL4AP40617 200 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 TAF6P49848 677 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 CLNKQ7Z7G1 428 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 CCDC185Q8N715 623 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 TFB1MQ8WVM0 346 aaKnown RBP17.14■□□□□ 0.33
VCAN-204ENST00000502527 RNF19AQ9NV58 838 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 DTLQ9NZJ0 730 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 RCOR3Q9P2K3 495 aaPredicted RBP17.14■□□□□ 0.33
VCAN-204ENST00000502527 MCM8Q9UJA3 840 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 PIN4Q9Y237 131 aaKnown RBP17.14■□□□□ 0.33
VCAN-204ENST00000502527 A0A0G2JND7 137 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 TRAFD1O14545 582 aaPredicted RBP17.14■□□□□ 0.33
VCAN-204ENST00000502527 SPTLC1O15269 473 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 ADCY6O43306 1168 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 HUS1O60921 280 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 BGNP21810 368 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 MATKP42679 507 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 ARFIP2P53365 341 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 SEMA5AQ13591 1074 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 SV2CQ496J9 727 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 NCBP2-AS2Q69YL0 99 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 ZNF449Q6P9G9 518 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 ZNF534Q76KX8 674 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 LIMS2Q7Z4I7 341 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 PSTKQ8IV42 348 aaKnown RBP17.14■□□□□ 0.33
VCAN-204ENST00000502527 TRIM42Q8IWZ5 723 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 UTP4Q969X6 686 aaKnown RBP17.14■□□□□ 0.33
VCAN-204ENST00000502527 TUBB6Q9BUF5 446 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 ZNF408Q9H9D4 720 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 EBF2Q9HAK2 575 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 KLK14Q9P0G3 267 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 KANSL3Q9P2N6 904 aa17.14■□□□□ 0.33
VCAN-204ENST00000502527 MTO1Q9Y2Z2 717 aaKnown RBP17.14■□□□□ 0.33
VCAN-204ENST00000502527 FAM159BA6NKW6 160 aa17.13■□□□□ 0.33
VCAN-204ENST00000502527 XPO1O14980 1071 aaKnown RBP17.13■□□□□ 0.33
VCAN-204ENST00000502527 SLC8A3P57103 927 aa17.13■□□□□ 0.33
VCAN-204ENST00000502527 SLC25A52Q3SY17 297 aa17.13■□□□□ 0.33
VCAN-204ENST00000502527 XKR4Q5GH76 650 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms