RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 SAMD11Q96NU1 681 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 MUC13Q9H3R2 512 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 PRSS50Q9UI38 385 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 DSEQ9UL01 958 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 CHKBQ9Y259 395 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 MRPL11Q9Y3B7 192 aaKnown RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 GAKO14976 1311 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 TTC21BQ7Z4L5 1316 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 WDR19Q8NEZ3 1342 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 UBA6A0AVT1 1052 aaPredicted RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 FOXO6A8MYZ6 492 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 GMFGO60234 142 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 CST3P01034 146 aaPredicted RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 PRR35P0CG20 571 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 TYMPP19971 482 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 SERPINA4P29622 427 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 SOX6P35712 828 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 MCAMP43121 646 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 HSD17B4P51659 736 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 EPHB3P54753 998 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 POLE2P56282 527 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 RWDD2BP57060 319 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 ZNF200P98182 395 aaPredicted RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 PLD1Q13393 1074 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 BTG3Q14201 252 aaPredicted RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 C9orf152Q5JTZ5 239 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 FCRLBQ6BAA4 426 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 SLC25A24Q6NUK1 477 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 TMEM270Q6UE05 265 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 RAB11FIP2Q7L804 512 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 LYSMD2Q8IV50 215 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 LINC00528Q8N1L1 170 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 FAM71DQ8N9W8 422 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 HIPK4Q8NE63 616 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 NUDT8Q8WV74 236 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 PTCHD1Q96NR3 888 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 GAD1Q99259 594 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 PTPN18Q99952 460 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 ERP44Q9BS26 406 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 ISCUQ9H1K1 167 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 SLC32A1Q9H598 525 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 SH2D4AQ9H788 454 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 MMRN2Q9H8L6 949 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 LTB4R2Q9NPC1 389 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 NCDNQ9UBB6 729 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 PPIEQ9UNP9 301 aaKnown RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 CCL27Q9Y4X3 112 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 SLITRK3O94933 977 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 KCNK5O95279 499 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 PTBP3O95758 552 aaKnown RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 RPA1P27694 616 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 CCR10P46092 362 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 LIG4P49917 911 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 SCN1BQ07699 218 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 RCN1Q15293 331 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 AARDQ4LEZ3 155 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 GKAP1Q5VSY0 366 aaPredicted RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 KLHL35Q6PF15 583 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 FAM83HQ6ZRV2 1179 aaPredicted RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 CENPQQ7L2Z9 268 aaPredicted RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 ADGRA1Q86SQ6 560 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 KLHL7Q8IXQ5 586 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 HDDC3Q8N4P3 179 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 SH3RF2Q8TEC5 729 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 LRRC59Q96AG4 307 aaKnown RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 UHRF1Q96T88 793 aaPredicted RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 TRIM54Q9BYV2 358 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 ASCC2Q9H1I8 757 aaPredicted RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 LDAHQ9H6V9 325 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 RPRD1BQ9NQG5 326 aaKnown RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 RXFP3Q9NSD7 469 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 HSPBP1Q9NZL4 362 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 NAGPAQ9UK23 515 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 RPH3AQ9Y2J0 694 aaPredicted RBP3.93□□□□□ -1.78
SUB1-202ENST00000502453 TELO2Q9Y4R8 837 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 TIMM22Q9Y584 194 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 CLCA3PQ9Y6N3 262 aa3.93□□□□□ -1.78
SUB1-202ENST00000502453 LRRIQ4A6NIV6 560 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 WTIPA6NIX2 430 aaPredicted RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 AXIN1O15169 862 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 TLR2O60603 784 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 PRAMEF12O95522 483 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 C22orf31O95567 290 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 POP4O95707 220 aaKnown RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 MALP21145 153 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 PTAFRP25105 342 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 DNAJB1P25685 340 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 CASP9P55211 416 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 COG7P83436 770 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 PRKCEQ02156 737 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 TNP2Q05952 138 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 GFPT1Q06210 699 aaPredicted RBP3.92□□□□□ -1.78
SUB1-202ENST00000502453 CCDC173Q0VFZ6 552 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 KCNAB1Q14722 419 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 ZNF484Q5JVG2 852 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 FIGNL1Q6PIW4 674 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 CEP128Q6ZU80 1094 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 MICU3Q86XE3 530 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 CDH26Q8IXH8 852 aa3.92□□□□□ -1.78
SUB1-202ENST00000502453 ULK2Q8IYT8 1036 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms