RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 TLX3O43711 291 aaPredicted RBP9.62□□□□□ -0.87
CCDC171-209ENST00000498725 GREM1O60565 184 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 EPHX1P07099 455 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 PRKCHP24723 683 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 ADORA2BP29275 332 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 OXTRP30559 389 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 ATP5C1P36542 298 aaKnown RBP9.62□□□□□ -0.87
CCDC171-209ENST00000498725 STAT6P42226 847 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 CEBPZQ03701 1054 aaKnown RBP9.62□□□□□ -0.87
CCDC171-209ENST00000498725 GOLGA8FQ08AF8 430 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 GOLGA8DPQ0D2H9 430 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 ALCAMQ13740 583 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 ZNF234Q14588 700 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 GEN1Q17RS7 908 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 C10orf120Q5SQS8 335 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 SNX30Q5VWJ9 437 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 ADAT2Q7Z6V5 191 aaKnown RBP9.62□□□□□ -0.87
CCDC171-209ENST00000498725 ZNF366Q8N895 744 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 CADM4Q8NFZ8 388 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 SORCS1Q8WY21 1168 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 ZNF516Q92618 1163 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 P2RY11Q96G91 374 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 SMARCD1Q96GM5 515 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 FCRL3Q96P31 734 aaPredicted RBP9.62□□□□□ -0.87
CCDC171-209ENST00000498725 CGRRF1Q99675 332 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 SMOQ99835 787 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 NUP58Q9BVL2 599 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 CIPCQ9C0C6 399 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 OLFML3Q9NRN5 406 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 FAM49BQ9NUQ9 324 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 OSER1Q9NX31 292 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 FTSJ1Q9UET6 329 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 ANKRD6Q9Y2G4 727 aa9.62□□□□□ -0.87
CCDC171-209ENST00000498725 SMG1Q96Q15 3661 aaKnown RBP9.62□□□□□ -0.87
CCDC171-209ENST00000498725 A0A1W2PQH9 124 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 H0Y8X5 98 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 PYCARD-AS1I3L0S3 204 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 DKK1O94907 266 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 FSBPO95073 299 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 KIF20AO95235 890 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 BMP15O95972 392 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 ZDHHC11BP0C7U3 371 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 JUPP14923 745 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 ACSL1P33121 698 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 TXLNAP40222 546 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 GRK6P43250 576 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 CASP4P49662 377 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 TUBP50607 506 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 AFF3P51826 1226 aaKnown RBP9.61□□□□□ -0.87
CCDC171-209ENST00000498725 COPAP53621 1224 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 ARID5AQ03989 594 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 BIRC3Q13489 604 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 TEAD4Q15561 434 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 SMAD1Q15797 465 aaKnown RBP9.61□□□□□ -0.87
CCDC171-209ENST00000498725 SNRNP35Q16560 246 aaKnown RBP9.61□□□□□ -0.87
CCDC171-209ENST00000498725 KCNT1Q5JUK3 1230 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 PRAMEF14Q5SWL7 426 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 LARP1BQ659C4 914 aaKnown RBP9.61□□□□□ -0.87
CCDC171-209ENST00000498725 GPRIN1Q7Z2K8 1008 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 METTL3Q86U44 580 aaKnown RBP9.61□□□□□ -0.87
CCDC171-209ENST00000498725 GATAD2AQ86YP4 633 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 NELFCDQ8IXH7 590 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 CCDC65Q8IXS2 484 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 FUKQ8N0W3 1084 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 PDILTQ8N807 584 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 ZMIZ2Q8NF64 920 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 SLC2A14Q8TDB8 520 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 UCMAQ8WVF2 138 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 ARID3AQ99856 593 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 SDCBP2Q9H190 292 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 NMUR1Q9HB89 426 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 TM9SF3Q9HD45 589 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 IL37Q9NZH6 218 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.61□□□□□ -0.87
CCDC171-209ENST00000498725 MARK1Q9P0L2 795 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 THAP10Q9P2Z0 257 aaPredicted RBP9.61□□□□□ -0.87
CCDC171-209ENST00000498725 SMC3Q9UQE7 1217 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 PCDHGB2Q9Y5G2 931 aa9.61□□□□□ -0.87
CCDC171-209ENST00000498725 TENM4Q6N022 2769 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 A0A087X0B3 334 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 VPS37CA5D8V6 355 aaPredicted RBP9.6□□□□□ -0.87
CCDC171-209ENST00000498725 KIAA0391O15091 583 aaKnown RBP9.6□□□□□ -0.87
CCDC171-209ENST00000498725 STC2O76061 302 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 RARGP13631 454 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 ACO1P21399 889 aaKnown RBP9.6□□□□□ -0.87
CCDC171-209ENST00000498725 HOXD13P35453 343 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 CCT8P50990 548 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 MFAP3P55082 362 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 CYP24A1Q07973 514 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 CCDC173Q0VFZ6 552 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 DNAJC3Q13217 504 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 PSMD6Q15008 389 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 PTPRNQ16849 979 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 ZNF699Q32M78 642 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 ZNF667Q5HYK9 610 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 C6orf118Q5T5N4 469 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 SERPINA13PQ6UXR4 307 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 DBX2Q6ZNG2 339 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 STXBP4Q6ZWJ1 553 aa9.6□□□□□ -0.87
CCDC171-209ENST00000498725 ZNF843Q8N446 348 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms