RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 CXorf38Q8TB03 319 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 TRAPPC9Q96Q05 1148 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 PEBP4Q96S96 227 aa17■□□□□ 0.31
COL6A1-206ENST00000498614 SRPK1Q96SB4 655 aaKnown RBP17■□□□□ 0.31
COL6A1-206ENST00000498614 DDX50Q9BQ39 737 aaKnown RBP17■□□□□ 0.31
COL6A1-206ENST00000498614 ZNF395Q9H8N7 513 aaPredicted RBP17■□□□□ 0.31
COL6A1-206ENST00000498614 KLHL33A6NCF5 533 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 MAGEC1O60732 1142 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 AOC2O75106 756 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 TRUB2O95900 331 aaKnown RBP16.99■□□□□ 0.31
COL6A1-206ENST00000498614 IL1BP01584 269 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 VTNP04004 478 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 TSHRP16473 764 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 GPD2P43304 727 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 PHKA2P46019 1235 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 YWHAGP61981 247 aaKnown RBP eCLIP16.99■□□□□ 0.31
COL6A1-206ENST00000498614 DPYSL3Q14195 570 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 ARHGAP24Q8N264 748 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 MCRS1Q96EZ8 462 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 PDZD7Q9H5P4 517 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 ERAP1Q9NZ08 941 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 PPARGC1AQ9UBK2 798 aaKnown RBP16.99■□□□□ 0.31
COL6A1-206ENST00000498614 AKT3Q9Y243 479 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 AVILO75366 819 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 ANPEPP15144 967 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 TTLL4Q14679 1199 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 AMHR2Q16671 573 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 MTHFD1LQ6UB35 978 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 RIPOR1Q6ZS17 1223 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 TMPRSS6Q8IU80 811 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 HPDLQ96IR7 371 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 PIWIL1Q96J94 861 aaKnown RBP16.99■□□□□ 0.31
COL6A1-206ENST00000498614 PANX3Q96QZ0 392 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 TRIM4Q9C037 500 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 ANGPTL2Q9UKU9 493 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 PLA2G4CQ9UP65 541 aa16.99■□□□□ 0.31
COL6A1-206ENST00000498614 APOC4-APOC2K7ER74 178 aa16.98■□□□□ 0.31
COL6A1-206ENST00000498614 COPEO14579 308 aa16.98■□□□□ 0.31
COL6A1-206ENST00000498614 KLF11O14901 512 aa16.98■□□□□ 0.31
COL6A1-206ENST00000498614 GRAP2O75791 330 aa16.98■□□□□ 0.31
COL6A1-206ENST00000498614 APOC2P02655 101 aa16.98■□□□□ 0.31
COL6A1-206ENST00000498614 RBP3P10745 1247 aa16.98■□□□□ 0.31
COL6A1-206ENST00000498614 CDO1Q16878 200 aa16.98■□□□□ 0.31
COL6A1-206ENST00000498614 C15orf59Q2T9L4 293 aaPredicted RBP16.98■□□□□ 0.31
COL6A1-206ENST00000498614 SLC10A6Q3KNW5 377 aa16.98■□□□□ 0.31
COL6A1-206ENST00000498614 CMASQ8NFW8 434 aaPredicted RBP16.98■□□□□ 0.31
COL6A1-206ENST00000498614 FRMD8P1Q9BZ68 369 aaPredicted RBP16.98■□□□□ 0.31
COL6A1-206ENST00000498614 KCNK4Q9NYG8 393 aa16.98■□□□□ 0.31
COL6A1-206ENST00000498614 TEX264Q9Y6I9 313 aa16.98■□□□□ 0.31
COL6A1-206ENST00000498614 TRIM49D1C9J1S8 452 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 F8W8V4 182 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 MCF2LO15068 1137 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 MCF2P10911 925 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 CYP3A5P20815 502 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 GABRB2P47870 512 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 KDSRQ06136 332 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 BST1Q10588 318 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 TRNP1Q6NT89 227 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 IZUMO2Q6UXV1 221 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 ARID3BQ8IVW6 561 aaPredicted RBP16.97■□□□□ 0.31
COL6A1-206ENST00000498614 SCUBE1Q8IWY4 988 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 GPRC5AQ8NFJ5 357 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 SPATA18Q8TC71 538 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 CFAP36Q96G28 342 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.97■□□□□ 0.31
COL6A1-206ENST00000498614 DDX43Q9NXZ2 648 aaKnown RBP16.97■□□□□ 0.31
COL6A1-206ENST00000498614 CCDC195A0A1B0GUA6 201 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 MANSC4A6NHS7 340 aaPredicted RBP16.97■□□□□ 0.31
COL6A1-206ENST00000498614 LGALS2P05162 132 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 LYNP07948 512 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 ZCCHC18P0CG32 403 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 VDRP11473 427 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 ARF4P18085 180 aaPredicted RBP16.97■□□□□ 0.31
COL6A1-206ENST00000498614 NDST1P52848 882 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 CDH6P55285 790 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 TNFAIP2Q03169 654 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 TMEM132DQ14C87 1099 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 TAF1CQ15572 869 aaPredicted RBP16.97■□□□□ 0.31
COL6A1-206ENST00000498614 NBPF20Q3BBV1 942 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 OR6B2Q6IFH4 312 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 NET1Q7Z628 596 aaPredicted RBP16.97■□□□□ 0.31
COL6A1-206ENST00000498614 IFNL1Q8IU54 200 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 ULK2Q8IYT8 1036 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 THTPAQ9BU02 230 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 IQCGQ9H095 443 aaKnown RBP16.97■□□□□ 0.31
COL6A1-206ENST00000498614 ASNSD1Q9NWL6 643 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 HTTP42858 3142 aa16.97■□□□□ 0.31
COL6A1-206ENST00000498614 I3L4J1 428 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 USP1O94782 785 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 ZNF286BP0CG31 522 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 KITP10721 976 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 ARHGAP1Q07960 439 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 GSTA3Q16772 222 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 FAM183BPQ6ZVS7 135 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 MYLK4Q86YV6 388 aaPredicted RBP16.96■□□□□ 0.31
COL6A1-206ENST00000498614 PPM1NQ8N819 430 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 RXFP2Q8WXD0 754 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 ACAP3Q96P50 834 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 GBP5Q96PP8 586 aa16.96■□□□□ 0.31
COL6A1-206ENST00000498614 NFKBIZQ9BYH8 718 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms