RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 A0A087WZ62 844 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 UQCRHLA0A096LP55 91 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 A0A0B4J269 797 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 SMIM35A0A1B0GVV1 85 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 SH3D21A4FU49 640 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 USP27XA6NNY8 438 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 LRRIQ3A6PVS8 624 aaPredicted RBP5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 HAS3O00219 553 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 EPHB6O15197 1021 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 SIGLEC6O43699 453 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 KRT86O43790 486 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 AKR1B10O60218 316 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 ZC3H11AO75152 810 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 F2P00734 622 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 RPLP2P05387 115 aaKnown RBP5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 ADRB2P07550 413 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 UQCRHP07919 91 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 C6orf222P0C671 652 aaPredicted RBP5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 SMIM10L2AP0DMW4 78 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 SMIM10L2BP0DMW5 78 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 RARBP10826 455 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 CYP2C9P11712 490 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 TNNI1P19237 187 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 ANXA13P27216 316 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 EIF4A3P38919 411 aaKnown RBP5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 MAGEA1P43355 309 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 GCLMP48507 274 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 MXI1P50539 228 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 MFAP3P55082 362 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 CCL23P55773 120 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 GJA9P57773 515 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 POU5F1Q01860 360 aaKnown RBP5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 KLHL30Q0D2K2 578 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 RAPGEF1Q13905 1077 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 MTF1Q14872 753 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 PCBP1Q15365 356 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 FSCN1Q16658 493 aaKnown RBP5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 CBWD6Q4V339 395 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 EPC2Q52LR7 807 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 TDRD12Q587J7 1177 aaKnown RBP5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 CBWD3Q5JTY5 395 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 CBWD5Q5RIA9 395 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 C10orf76Q5T2E6 689 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 MEI1Q5TIA1 1274 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 CCSAPQ6IQ19 270 aaPredicted RBP5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 NFRKBQ6P4R8 1299 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 TRIM65Q6PJ69 517 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 ZNF662Q6ZS27 426 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 TSHZ1Q6ZSZ6 1077 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 TOGARAM2Q6ZUX3 1019 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 KIAA1328Q86T90 577 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 RNF180Q86T96 592 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 CBWD2Q8IUF1 395 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 FAM126BQ8IXS8 530 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 NME8Q8N427 588 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 LINC01465Q8N7H1 131 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 C7orf31Q8N865 590 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 FBXL13Q8NEE6 735 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 CCDC127Q96BQ5 260 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 ZBTB45Q96K62 511 aaPredicted RBP5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 C16orf45Q96MC5 204 aaPredicted RBP5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 SCLT1Q96NL6 688 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 FDXACB1Q9BRP7 624 aaPredicted RBP5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 ADPGKQ9BRR6 497 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 MTG1Q9BT17 334 aaPredicted RBP5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 STK33Q9BYT3 514 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 GCOM2Q9BZD3 368 aaPredicted RBP5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 TMEM117Q9H0C3 514 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 CCDC113Q9H0I3 377 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 GANQ9H2C0 597 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 HAUS4Q9H6D7 363 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 SIX2Q9NPC8 291 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 SETD4Q9NVD3 440 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 RAB20Q9NX57 234 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 RBAKQ9NYW8 714 aaPredicted RBP5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 APEX2Q9UBZ4 518 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 PRKAG3Q9UGI9 489 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 DNAJC12Q9UKB3 198 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 TNFSF13BQ9Y275 285 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 FAN1Q9Y2M0 1017 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 COQ4Q9Y3A0 265 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 R3HCC1Q9Y3T6 440 aaKnown RBP5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 TRIOO75962 3097 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 SIP14410 1827 aa5.67□□□□□ -1.5
HMGXB4-208ENST00000498325 KAT6AQ92794 2004 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 C17orf102A2RUQ5 167 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 LCHNA4D1U4 455 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 MYADML2A6NDP7 307 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 ADCY6O43306 1168 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 KIF5CO60282 957 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 NOBOXO60393 691 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 GFPT2O94808 682 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 ERLIN2O94905 339 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 UBOX5O94941 541 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 IL18RAPO95256 599 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 LCA5LO95447 670 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 DLATP10515 647 aaKnown RBP5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 MCF2P10911 925 aa5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 HARSP12081 509 aaKnown RBP5.66□□□□□ -1.5
HMGXB4-208ENST00000498325 ACTN1P12814 892 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms