RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 CDH5P33151 784 aaPredicted RBP11.77□□□□□ -0.53
ERCC8-208ENST00000497892 KRT9P35527 623 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 GOLGA8FQ08AF8 430 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 GOLGA8DPQ0D2H9 430 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 BTBD8Q5XKL5 378 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 LRSAM1Q6UWE0 723 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 RSRC2Q7L4I2 434 aaKnown RBP11.77□□□□□ -0.53
ERCC8-208ENST00000497892 NOP9Q86U38 636 aaKnown RBP11.77□□□□□ -0.53
ERCC8-208ENST00000497892 MIB1Q86YT6 1006 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 C1orf131Q8NDD1 294 aaKnown RBP11.77□□□□□ -0.53
ERCC8-208ENST00000497892 TTC8Q8TAM2 541 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 CLEC4CQ8WTT0 213 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 DDX1Q92499 740 aaKnown RBP11.77□□□□□ -0.53
ERCC8-208ENST00000497892 FAM3CQ92520 227 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 WBP2Q969T9 261 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 CHFRQ96EP1 664 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 NAP1L5Q96NT1 182 aaPredicted RBP11.77□□□□□ -0.53
ERCC8-208ENST00000497892 CPXM1Q96SM3 734 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 NELL2Q99435 816 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 MIS12Q9H081 205 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 ECT2Q9H8V3 914 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 ABCC13Q9NSE7 274 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 OLA1Q9NTK5 396 aaKnown RBP11.77□□□□□ -0.53
ERCC8-208ENST00000497892 TBC1D14Q9P2M4 693 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 NOCTQ9UK39 431 aaKnown RBP11.77□□□□□ -0.53
ERCC8-208ENST00000497892 SH3BP1Q9Y3L3 701 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 SIT1Q9Y3P8 196 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 CEP83Q9Y592 693 aa11.77□□□□□ -0.53
ERCC8-208ENST00000497892 CACNA1HO95180 2353 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 PAPSS1O43252 624 aaPredicted RBP11.76□□□□□ -0.53
ERCC8-208ENST00000497892 LSM8O95777 96 aaKnown RBP11.76□□□□□ -0.53
ERCC8-208ENST00000497892 LTFP02788 710 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 CYP17A1P05093 508 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 IRF1P10914 325 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 STAT1P42224 750 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 FANCCQ00597 558 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 EFEMP1Q12805 493 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 NR1I3Q14994 352 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 UBXN2BQ14CS0 331 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 MSANTD2Q6P1R3 559 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 TXNDC11Q6PKC3 985 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 HTR3DQ70Z44 454 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 ZNF677Q86XU0 584 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 BBS7Q8IWZ6 715 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 RNF139Q8WU17 664 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 EDEM1Q92611 657 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 GOLGA1Q92805 767 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 OTUB2Q96DC9 234 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 PPP1R13BQ96KQ4 1090 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 NOX5Q96PH1 765 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 PHOX2BQ99453 314 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 TRIM62Q9BVG3 475 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 LINC00597Q9H2U6 94 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 TSPY26PQ9H489 355 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 MARCH2Q9P0N8 246 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 DLGAP2Q9P1A6 1054 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 TJP2Q9UDY2 1190 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 RASAL2Q9UJF2 1139 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 STRIP2Q9ULQ0 834 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 HCN4Q9Y3Q4 1203 aa11.76□□□□□ -0.53
ERCC8-208ENST00000497892 MTF2Q9Y483 593 aaPredicted RBP11.76□□□□□ -0.53
ERCC8-208ENST00000497892 FAM170BA6NMN3 283 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 STC2O76061 302 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 GJA4P35212 333 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 COG7P83436 770 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 AMPD2Q01433 879 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 CDR2Q01850 454 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 PTPN20Q4JDL3 420 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 TAF3Q5VWG9 929 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 BEND5Q7L4P6 421 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 CACNA2D4Q7Z3S7 1137 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 ADGRG2Q8IZP9 1017 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 TMEM35BQ8NCS4 154 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 IPO4Q8TEX9 1081 aaKnown RBP11.75□□□□□ -0.53
ERCC8-208ENST00000497892 SLC20A1Q8WUM9 679 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 BAP1Q92560 729 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 CLDN23Q96B33 292 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 PIWIL1Q96J94 861 aaKnown RBP11.75□□□□□ -0.53
ERCC8-208ENST00000497892 TTYH3Q9C0H2 523 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 SLC6A16Q9GZN6 736 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 PDCL3Q9H2J4 239 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 LSM7Q9UK45 103 aaKnown RBP11.75□□□□□ -0.53
ERCC8-208ENST00000497892 MYO6Q9UM54 1294 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 NDRG2Q9UN36 371 aaKnown RBP11.75□□□□□ -0.53
ERCC8-208ENST00000497892 HBS1LQ9Y450 684 aaKnown RBP11.75□□□□□ -0.53
ERCC8-208ENST00000497892 MYOFQ9NZM1 2061 aa11.75□□□□□ -0.53
ERCC8-208ENST00000497892 ADH1CP00326 375 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 KLKB1P03952 638 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 ERBB2P04626 1255 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 FYNP06241 537 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 DCNP07585 359 aaKnown RBP11.74□□□□□ -0.53
ERCC8-208ENST00000497892 MMEP08473 750 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 CHRNB2P17787 502 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 PBX1P40424 430 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 MAGEA9P43362 315 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 RPS9P46781 194 aaKnown RBP11.74□□□□□ -0.53
ERCC8-208ENST00000497892 SNX16P57768 344 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 ZNF445P59923 1031 aa11.74□□□□□ -0.53
ERCC8-208ENST00000497892 YWHAZP63104 245 aaKnown RBP11.74□□□□□ -0.53
ERCC8-208ENST00000497892 NOMO3P69849 1222 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms