RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 CDX4O14627 284 aaPredicted RBP8.28□□□□□ -1.08
VPS45-210ENST00000497638 SIGLEC6O43699 453 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 GREM1O60565 184 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 GJA1P17302 382 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 GLRA2P23416 452 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 RDXP35241 583 aaKnown RBP8.28□□□□□ -1.08
VPS45-210ENST00000497638 BUD31P41223 144 aaPredicted RBP8.28□□□□□ -1.08
VPS45-210ENST00000497638 CLCNKBP51801 687 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 ARPP19P56211 112 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 NLRP5P59047 1200 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 GRSF1Q12849 480 aaKnown RBP eCLIP8.28□□□□□ -1.08
VPS45-210ENST00000497638 PLD1Q13393 1074 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 UPP1Q16831 310 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 ITPRIPL2Q3MIP1 535 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 TMEM196Q5HYL7 178 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 ZNF280DQ6N043 979 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 PKN3Q6P5Z2 889 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 CD300LGQ6UXG3 332 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 GK5Q6ZS86 529 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 ARID3BQ8IVW6 561 aaPredicted RBP8.28□□□□□ -1.08
VPS45-210ENST00000497638 ZBTB8OSQ8IWT0 167 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 SIGLEC10Q96LC7 697 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 C20orf173Q96LM9 149 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 CCDC43Q96MW1 224 aaKnown RBP8.28□□□□□ -1.08
VPS45-210ENST00000497638 PPP1R10Q96QC0 940 aaKnown RBP8.28□□□□□ -1.08
VPS45-210ENST00000497638 PDZD7Q9H5P4 517 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 FBXL5Q9UKA1 691 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 TPCN1Q9ULQ1 816 aa8.28□□□□□ -1.08
VPS45-210ENST00000497638 PI4KAP42356 2102 aa8.27□□□□□ -1.08
VPS45-210ENST00000497638 LRRIQ4A6NIV6 560 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 I3L4J1 428 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 SLC37A4O43826 429 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 LYPLA2O95372 231 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 APBB3O95704 486 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 CAPNS1P04632 268 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 HMGB1P09429 215 aaKnown RBP8.27□□□□□ -1.09
VPS45-210ENST00000497638 PNLIPP16233 465 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 GCFC2P16383 781 aaKnown RBP8.27□□□□□ -1.09
VPS45-210ENST00000497638 PI3P19957 117 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 BRCC3P46736 316 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 CYP4A11Q02928 519 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 LMAN2Q12907 356 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 MRPL58Q14197 206 aaKnown RBP8.27□□□□□ -1.09
VPS45-210ENST00000497638 KRT32Q14532 448 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 UAP1L1Q3KQV9 507 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 DCAF4L1Q3SXM0 396 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 BBS9Q3SYG4 887 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 SEZ6Q53EL9 994 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 GLRA4Q5JXX5 417 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 PMS2CLQ68D20 193 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 CDCA2Q69YH5 1023 aaPredicted RBP8.27□□□□□ -1.09
VPS45-210ENST00000497638 C19orf48Q6RUI8 117 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 NLRC3Q7RTR2 1065 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 TMC8Q8IU68 726 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 FAM177A1Q8N128 213 aaPredicted RBP8.27□□□□□ -1.09
VPS45-210ENST00000497638 TTC8Q8TAM2 541 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 RELTQ969Z4 430 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 DYDC2Q96IM9 177 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 ZFYVE19Q96K21 471 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 MKRN2Q9H000 416 aaKnown RBP8.27□□□□□ -1.09
VPS45-210ENST00000497638 POLR3FQ9H1D9 316 aaPredicted RBP8.27□□□□□ -1.09
VPS45-210ENST00000497638 C2orf40Q9H1Z8 148 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 CXCL16Q9H2A7 254 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 FZD8Q9H461 694 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 ANKEF1Q9NU02 776 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 SLC38A7Q9NVC3 462 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 THG1LQ9NWX6 298 aaKnown RBP8.27□□□□□ -1.09
VPS45-210ENST00000497638 RGL1Q9NZL6 768 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 EVLQ9UI08 416 aaPredicted RBP8.27□□□□□ -1.09
VPS45-210ENST00000497638 GGT7Q9UJ14 662 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 YIPF1Q9Y548 306 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 TRIP11Q15643 1979 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 THADAQ6YHU6 1953 aa8.27□□□□□ -1.09
VPS45-210ENST00000497638 KIF26AQ9ULI4 1882 aaPredicted RBP8.27□□□□□ -1.09
VPS45-210ENST00000497638 CCDC194A0A1B0GVG4 234 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 HRKO00198 91 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 TRDMT1O14717 391 aaKnown RBP8.26□□□□□ -1.09
VPS45-210ENST00000497638 DCLK1O15075 740 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 FGF19O95750 216 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 IFNAR1P17181 557 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 DRD1P21728 446 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 IGFBP6P24592 240 aaPredicted RBP8.26□□□□□ -1.09
VPS45-210ENST00000497638 VIPR1P32241 457 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 CCNFP41002 786 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 MCM2P49736 904 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 EPHB3P54753 998 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 SIM1P81133 766 aaPredicted RBP8.26□□□□□ -1.09
VPS45-210ENST00000497638 AMPD2Q01433 879 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 PRPF4BQ13523 1007 aaKnown RBP8.26□□□□□ -1.09
VPS45-210ENST00000497638 CTTNQ14247 550 aaKnown RBP8.26□□□□□ -1.09
VPS45-210ENST00000497638 MAPK6Q16659 721 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 COL28A1Q2UY09 1125 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 FBXO43Q4G163 708 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 CTXN3Q4LDR2 81 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 ARHGAP15Q53QZ3 475 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 NCAPH2Q6IBW4 605 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 GALNT17Q6IS24 598 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 FSTL4Q6MZW2 842 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 GALNT18Q6P9A2 607 aa8.26□□□□□ -1.09
VPS45-210ENST00000497638 SYT13Q7L8C5 426 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms