RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 USP29Q9HBJ7 922 aa4.96□□□□□ -1.62
TRIM4-205ENST00000496896 STARD7Q9NQZ5 370 aa4.96□□□□□ -1.62
TRIM4-205ENST00000496896 GEMIN8Q9NWZ8 242 aaKnown RBP4.96□□□□□ -1.62
TRIM4-205ENST00000496896 ELOVL5Q9NYP7 299 aa4.96□□□□□ -1.62
TRIM4-205ENST00000496896 IKBKBO14920 756 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 FYB1O15117 783 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 CCNT2O60583 730 aaKnown RBP4.95□□□□□ -1.62
TRIM4-205ENST00000496896 PRAMEF2O60811 474 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 MBPP02686 304 aaPredicted RBP4.95□□□□□ -1.62
TRIM4-205ENST00000496896 IGKV2-30P06310 120 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 IDEP14735 1019 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 TACR3P29371 465 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 JAK3P52333 1124 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 RPS13P62277 151 aaKnown RBP4.95□□□□□ -1.62
TRIM4-205ENST00000496896 GPS1Q13098 491 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 MAPK7Q13164 816 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 SLC14A1Q13336 389 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 AWAT1Q58HT5 328 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 CC2D1BQ5T0F9 858 aaKnown RBP4.95□□□□□ -1.62
TRIM4-205ENST00000496896 KIAA0408Q6ZU52 694 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 DPP9Q86TI2 863 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 C16orf71Q8IYS4 520 aaPredicted RBP4.95□□□□□ -1.62
TRIM4-205ENST00000496896 C9orf106Q8NAJ2 232 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 BCAS4Q8TDM0 211 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 BRI3BPQ8WY22 251 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 OVCA2Q8WZ82 227 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 ADGRE3Q9BY15 652 aa4.95□□□□□ -1.62
TRIM4-205ENST00000496896 SPRTNQ9H040 489 aaPredicted RBP4.95□□□□□ -1.62
TRIM4-205ENST00000496896 TRNAU1APQ9NX07 287 aaKnown RBP4.95□□□□□ -1.62
TRIM4-205ENST00000496896 ZMYM2Q9UBW7 1377 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 SOCS2O14508 198 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 KPNA5O15131 536 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 KCNAB3O43448 404 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 CA12O43570 354 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 TLR2O60603 784 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 USP12O75317 370 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 TMEM191BP0C7N4 346 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 MATN1P21941 496 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 DUSP1P28562 367 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 GALNSP34059 522 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 STT3AP46977 705 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 PRIM2P49643 509 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 ID2Q02363 134 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 PFKFB3Q16875 520 aaPredicted RBP4.94□□□□□ -1.62
TRIM4-205ENST00000496896 FAM110CQ1W6H9 321 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 SLC5A9Q2M3M2 681 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 COBLL1Q53SF7 1204 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 FAM90A2PQ658T7 463 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 CRTC1Q6UUV9 634 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 P3H2Q8IVL5 708 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 CLASRPQ8N2M8 674 aaKnown RBP4.94□□□□□ -1.62
TRIM4-205ENST00000496896 NANOGP1Q8N7R0 232 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 ZNF366Q8N895 744 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 CCDC150Q8NCX0 1101 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 SNX27Q96L92 541 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 NUDT22Q9BRQ3 303 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 TMEM8AQ9HCN3 771 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 AFG3L2Q9Y4W6 797 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 SCRIBQ14160 1630 aa4.94□□□□□ -1.62
TRIM4-205ENST00000496896 LY6G6EA0A0G2JKS1 128 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 ANO9A1A5B4 782 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 CTSAP10619 480 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 MMP8P22894 467 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 GABRB3P28472 473 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 WDR5P61964 334 aaKnown RBP4.93□□□□□ -1.62
TRIM4-205ENST00000496896 ATP1A4Q13733 1029 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 RABEP1Q15276 862 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 KLHDC7AQ5VTJ3 777 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 RRAGBQ5VZM2 374 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 SHC4Q6S5L8 630 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 CCDC28AQ8IWP9 274 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 CCDC33Q8N5R6 958 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 PJA1Q8NG27 643 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 LRRC46Q96FV0 321 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 GDF15Q99988 308 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 NUAK2Q9H093 628 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 SAP30LQ9HAJ7 183 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 BAZ1AQ9NRL2 1556 aaPredicted RBP4.93□□□□□ -1.62
TRIM4-205ENST00000496896 MTMR4Q9NYA4 1195 aa4.93□□□□□ -1.62
TRIM4-205ENST00000496896 SIRT4Q9Y6E7 314 aaPredicted RBP4.93□□□□□ -1.62
TRIM4-205ENST00000496896 APOL1O14791 398 aa4.92□□□□□ -1.62
TRIM4-205ENST00000496896 EGR1P18146 543 aa4.92□□□□□ -1.62
TRIM4-205ENST00000496896 PBX1P40424 430 aa4.92□□□□□ -1.62
TRIM4-205ENST00000496896 TM4SF4P48230 202 aa4.92□□□□□ -1.62
TRIM4-205ENST00000496896 RAE1P78406 368 aaKnown RBP4.92□□□□□ -1.62
TRIM4-205ENST00000496896 SLC9C1Q4G0N8 1177 aa4.92□□□□□ -1.62
TRIM4-205ENST00000496896 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.92□□□□□ -1.62
TRIM4-205ENST00000496896 PIP4P1Q86T03 277 aa4.92□□□□□ -1.62
TRIM4-205ENST00000496896 MPLKIPQ8TAP9 179 aa4.92□□□□□ -1.62
TRIM4-205ENST00000496896 AS3MTQ9HBK9 375 aa4.92□□□□□ -1.62
TRIM4-205ENST00000496896 ABHD10Q9NUJ1 306 aa4.92□□□□□ -1.62
TRIM4-205ENST00000496896 CA14Q9ULX7 337 aa4.92□□□□□ -1.62
TRIM4-205ENST00000496896 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.91□□□□□ -1.62
TRIM4-205ENST00000496896 INPPL1O15357 1258 aa4.91□□□□□ -1.62
TRIM4-205ENST00000496896 FGF18O76093 207 aa4.91□□□□□ -1.62
TRIM4-205ENST00000496896 CD63P08962 238 aa4.91□□□□□ -1.62
TRIM4-205ENST00000496896 HOXD9P28356 352 aaPredicted RBP4.91□□□□□ -1.62
TRIM4-205ENST00000496896 RBMS2Q15434 407 aaKnown RBP4.91□□□□□ -1.62
TRIM4-205ENST00000496896 IGFBPL1Q8WX77 278 aa4.91□□□□□ -1.62
TRIM4-205ENST00000496896 PRR11Q96HE9 360 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms