RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ADIGQ0VDE8 80 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 PREPLQ4J6C6 727 aaPredicted RBP14.97□□□□□ -0.01
VTI1A-209ENST00000496445 AASDHQ4L235 1098 aaPredicted RBP14.97□□□□□ -0.01
VTI1A-209ENST00000496445 USP39Q53GS9 565 aaKnown RBP14.97□□□□□ -0.01
VTI1A-209ENST00000496445 FYB2Q5VWT5 728 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 TCEAL6Q6IPX3 200 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 TMEM270Q6UE05 265 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 ARHGEF19Q8IW93 802 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 ARHGAP18Q8N392 663 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 FRMD1Q8N878 549 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 UBA3Q8TBC4 463 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 KCNV2Q8TDN2 545 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 HMGB4Q8WW32 186 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 BHMTQ93088 406 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 TCEAL3Q969E4 200 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 NT5C1BQ96P26 610 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 XPO6Q96QU8 1125 aaKnown RBP14.97□□□□□ -0.01
VTI1A-209ENST00000496445 ACOX2Q99424 681 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 CD248Q9HCU0 757 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 POLMQ9NP87 494 aaPredicted RBP14.97□□□□□ -0.01
VTI1A-209ENST00000496445 WDR35Q9P2L0 1181 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 FBXO10Q9UK96 956 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 AGO1Q9UL18 857 aaKnown RBP14.97□□□□□ -0.01
VTI1A-209ENST00000496445 A0A1W2PQF6 199 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 BICDL2A1A5D9 508 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 BCLAF3A2AJT9 711 aaKnown RBP14.96□□□□□ -0.01
VTI1A-209ENST00000496445 PENKP01210 267 aaPredicted RBP14.96□□□□□ -0.01
VTI1A-209ENST00000496445 CALCAP01258 141 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 P2RY2P41231 377 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 WASP42768 502 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 DGKGP49619 791 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 SLC8A3P57103 927 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 COG7P83436 770 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 CREB5Q02930 508 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 PAK1Q13153 545 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 TRMT11Q7Z4G4 463 aaKnown RBP14.96□□□□□ -0.01
VTI1A-209ENST00000496445 C11orf74Q86VG3 221 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 TRIM59Q8IWR1 403 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 C12orf50Q8NA57 414 aaPredicted RBP14.96□□□□□ -0.01
VTI1A-209ENST00000496445 RLN3Q8WXF3 142 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 VPS45Q9NRW7 570 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 MARCH2Q9P0N8 246 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 HESX1Q9UBX0 185 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 MBD1Q9UIS9 605 aaPredicted RBP14.96□□□□□ -0.01
VTI1A-209ENST00000496445 CIZ1Q9ULV3 898 aaPredicted RBP14.96□□□□□ -0.01
VTI1A-209ENST00000496445 ZNF510Q9Y2H8 683 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 PCDHB4Q9Y5E5 795 aa14.96□□□□□ -0.01
VTI1A-209ENST00000496445 CKAP5Q14008 2032 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 CNOT1A5YKK6 2376 aaKnown RBP14.95□□□□□ -0.02
VTI1A-209ENST00000496445 SLC12A8A0AV02 714 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 YJEFN3A6XGL0 299 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 E7ENQ6 273 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 P4HA2O15460 535 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 GABBR2O75899 941 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 PAEPP09466 180 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 SETSIPP0DME0 302 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 HOXB2P14652 356 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 GABRG2P18507 467 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 BRD2P25440 801 aaKnown RBP14.95□□□□□ -0.02
VTI1A-209ENST00000496445 NTSR1P30989 418 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 ZNF132P52740 706 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 LIMK1P53667 647 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 MARSP56192 900 aaKnown RBP14.95□□□□□ -0.02
VTI1A-209ENST00000496445 KCNH2Q12809 1159 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 MAP7D1Q3KQU3 841 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 LCLAT1Q6UWP7 414 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 RSRC2Q7L4I2 434 aaKnown RBP14.95□□□□□ -0.02
VTI1A-209ENST00000496445 RRAGAQ7L523 313 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 DENND1CQ8IV53 801 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 FMNL3Q8IVF7 1028 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 FAM217AQ8IXS0 508 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 PPM1KQ8N3J5 372 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 KCTD13Q8WZ19 329 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 GABRG3Q99928 467 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 LRRC4Q9HBW1 653 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 BCCIPQ9P287 314 aaKnown RBP eCLIP14.95□□□□□ -0.02
VTI1A-209ENST00000496445 KIAA1257Q9ULG3 409 aa14.95□□□□□ -0.02
VTI1A-209ENST00000496445 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.95□□□□□ -0.02
VTI1A-209ENST00000496445 LCP1P13796 627 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 RGS7P49802 495 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 MFAP3P55082 362 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 DAOAP59103 153 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 GCNT1Q02742 428 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 TRIP4Q15650 581 aaPredicted RBP14.94□□□□□ -0.02
VTI1A-209ENST00000496445 KIAA1211LQ6NV74 962 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 PMF1Q6P1K2 205 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 NUDT18Q6ZVK8 323 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 RBBP8NLQ8NC74 664 aaPredicted RBP14.94□□□□□ -0.02
VTI1A-209ENST00000496445 SLC35F5Q8WV83 523 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 EDEM1Q92611 657 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 PLD4Q96BZ4 506 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 ERLEC1Q96DZ1 483 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 KREMEN1Q96MU8 473 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 IPO9Q96P70 1041 aaKnown RBP14.94□□□□□ -0.02
VTI1A-209ENST00000496445 DCLK3Q9C098 648 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 CACNA2D2Q9NY47 1150 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 CALCOCO1Q9P1Z2 691 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 STRIP2Q9ULQ0 834 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 CLEC4EQ9ULY5 219 aa14.94□□□□□ -0.02
VTI1A-209ENST00000496445 SLC27A6Q9Y2P4 619 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms