RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 FBXO10Q9UK96 956 aa13.36□□□□□ -0.27
PTPRF-214ENST00000496043 CTNND2Q9UQB3 1225 aa13.36□□□□□ -0.27
PTPRF-214ENST00000496043 MYOFQ9NZM1 2061 aa13.36□□□□□ -0.27
PTPRF-214ENST00000496043 WDR87Q6ZQQ6 2873 aa13.36□□□□□ -0.27
PTPRF-214ENST00000496043 SDK1Q7Z5N4 2213 aa13.36□□□□□ -0.27
PTPRF-214ENST00000496043 BCLAF3A2AJT9 711 aaKnown RBP13.35□□□□□ -0.27
PTPRF-214ENST00000496043 RNF225M0QZC1 329 aaPredicted RBP13.35□□□□□ -0.27
PTPRF-214ENST00000496043 O00370 1275 aa13.35□□□□□ -0.27
PTPRF-214ENST00000496043 CAVIN2O95810 425 aa13.35□□□□□ -0.27
PTPRF-214ENST00000496043 CORO1AP31146 461 aaKnown RBP13.35□□□□□ -0.27
PTPRF-214ENST00000496043 CREB5Q02930 508 aa13.35□□□□□ -0.27
PTPRF-214ENST00000496043 PAK1Q13153 545 aa13.35□□□□□ -0.27
PTPRF-214ENST00000496043 STILQ15468 1287 aa13.35□□□□□ -0.27
PTPRF-214ENST00000496043 BSPRYQ5W0U4 402 aa13.35□□□□□ -0.27
PTPRF-214ENST00000496043 IL31Q6EBC2 164 aa13.35□□□□□ -0.27
PTPRF-214ENST00000496043 RRAGAQ7L523 313 aa13.35□□□□□ -0.27
PTPRF-214ENST00000496043 DENND1CQ8IV53 801 aa13.35□□□□□ -0.27
PTPRF-214ENST00000496043 TRIM59Q8IWR1 403 aa13.35□□□□□ -0.27
PTPRF-214ENST00000496043 SIX6OS1Q8N1H7 587 aa13.35□□□□□ -0.27
PTPRF-214ENST00000496043 TRIML1Q8N9V2 468 aa13.35□□□□□ -0.27
PTPRF-214ENST00000496043 HMGB4Q8WW32 186 aa13.35□□□□□ -0.27
PTPRF-214ENST00000496043 NDRG1Q92597 394 aaKnown RBP13.35□□□□□ -0.27
PTPRF-214ENST00000496043 ABCC13Q9NSE7 274 aa13.35□□□□□ -0.27
PTPRF-214ENST00000496043 PLK2Q9NYY3 685 aa13.35□□□□□ -0.27
PTPRF-214ENST00000496043 AGO1Q9UL18 857 aaKnown RBP13.35□□□□□ -0.27
PTPRF-214ENST00000496043 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.35□□□□□ -0.27
PTPRF-214ENST00000496043 CEP250Q9BV73 2442 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 TCRBV21S2A2A0A5A6 115 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 PRRT4C9JH25 899 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 AFPP02771 609 aaKnown RBP13.34□□□□□ -0.27
PTPRF-214ENST00000496043 CYBBP04839 570 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 LCP1P13796 627 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 P2RY2P41231 377 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 WASP42768 502 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 LIMK1P53667 647 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 MARSP56192 900 aaKnown RBP13.34□□□□□ -0.27
PTPRF-214ENST00000496043 UBE2HP62256 183 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 GCNT1Q02742 428 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 PKDCCQ504Y2 493 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 PMS2CLQ68D20 193 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 TOGARAM2Q6ZUX3 1019 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 LPCAT2Q7L5N7 544 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 CHPFQ8IZ52 775 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 SCML4Q8N228 414 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 SLC35F5Q8WV83 523 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 RLN3Q8WXF3 142 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 TFAP2BQ92481 460 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 DDX1Q92499 740 aaKnown RBP13.34□□□□□ -0.27
PTPRF-214ENST00000496043 BHMTQ93088 406 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 PLD4Q96BZ4 506 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 SPACA7Q96KW9 195 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 CNGB3Q9NQW8 809 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 KIAA1468Q9P260 1216 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 HCN2Q9UL51 889 aa13.34□□□□□ -0.27
PTPRF-214ENST00000496043 HBS1LQ9Y450 684 aaKnown RBP13.34□□□□□ -0.27
PTPRF-214ENST00000496043 YJEFN3A6XGL0 299 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 E7ENQ6 273 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 GFRA2O00451 464 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 PENKP01210 267 aaPredicted RBP13.33□□□□□ -0.28
PTPRF-214ENST00000496043 HOXB2P14652 356 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 BCKDHBP21953 392 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 DHPSP49366 369 aaPredicted RBP13.33□□□□□ -0.28
PTPRF-214ENST00000496043 HARS2P49590 506 aaKnown RBP13.33□□□□□ -0.28
PTPRF-214ENST00000496043 ADIGQ0VDE8 80 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 E2F5Q15329 346 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 TRIP4Q15650 581 aaPredicted RBP13.33□□□□□ -0.28
PTPRF-214ENST00000496043 CAMK4Q16566 473 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 SPDYCQ5MJ68 293 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 FYB2Q5VWT5 728 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 EGFLAMQ63HQ2 1017 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 PMF1Q6P1K2 205 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 BHLHA9Q7RTU4 235 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 CREBRFQ8IUR6 639 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 FMNL3Q8IVF7 1028 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 CPXM2Q8N436 756 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 RBBP8NLQ8NC74 664 aaPredicted RBP13.33□□□□□ -0.28
PTPRF-214ENST00000496043 IRGQQ8WZA9 623 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 EDEM1Q92611 657 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 KAT5Q92993 513 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 HSFY1Q96LI6 401 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 SMOC1Q9H4F8 434 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 CHMP5Q9NZZ3 219 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 SLC27A6Q9Y2P4 619 aa13.33□□□□□ -0.28
PTPRF-214ENST00000496043 RALGAPA1Q6GYQ0 2036 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 A0A1W2PQF6 199 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 KHNYNO15037 678 aaKnown RBP13.32□□□□□ -0.28
PTPRF-214ENST00000496043 TIMM44O43615 452 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 GABRG2P18507 467 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 BRD2P25440 801 aaKnown RBP13.32□□□□□ -0.28
PTPRF-214ENST00000496043 RGS7P49802 495 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 DAOAP59103 153 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 MAP7D1Q3KQU3 841 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 MPPE1Q53F39 396 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 STPG1Q5TH74 334 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 CYP2U1Q7Z449 544 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 ARHGEF19Q8IW93 802 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 IPO4Q8TEX9 1081 aaKnown RBP13.32□□□□□ -0.28
PTPRF-214ENST00000496043 DDI1Q8WTU0 396 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 UCMAQ8WVF2 138 aa13.32□□□□□ -0.28
PTPRF-214ENST00000496043 GOLGA1Q92805 767 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms